RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 NUP214P35658 2090 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 FREM2Q5SZK8 3169 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 TRBV23OR9-2A0A075B6M9 112 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 DYTNA2CJ06 578 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 FAM234BA2RU67 622 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 OR5K4A6NMS3 321 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 FOXE1O00358 373 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 MRASO14807 208 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 TLX3O43711 291 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 PDE5AO76074 875 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 KLHL18O94889 574 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 PRPS2P11908 318 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 ACPPP15309 386 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 JUNDP17535 347 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 ITPKBP27987 946 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 CCR8P51685 355 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 POLR2JP52435 117 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 UCNP55089 124 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 RPS13P62277 151 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 PRDX1Q06830 199 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 PROX2Q3B8N5 592 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 PIGGQ5H8A4 983 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 PAGE3Q5JUK9 113 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 ICE2Q659A1 982 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 TMIGD1Q6UXZ0 262 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 KANSL1Q7Z3B3 1105 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 TAF8Q7Z7C8 310 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 AMIGO1Q86WK6 493 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 TRIM48Q8IWZ4 208 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 ADGRF3Q8IZF5 1079 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 PGAM4Q8N0Y7 254 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 NAGSQ8N159 534 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 KRTCAP2Q8N6L1 136 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 CLHC1Q8NHS4 586 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 CHTF18Q8WVB6 975 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 LCN9Q8WX39 176 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 SPDL1Q96EA4 605 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 APOLD1Q96LR9 279 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 ZNF578Q96N58 590 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 TMEM74Q96NL1 305 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 GPATCH1Q9BRR8 931 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 SLC39A3Q9BRY0 314 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 WDR41Q9HAD4 459 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 SLC6A20Q9NP91 592 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 NMRK1Q9NWW6 199 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 OR6C2Q9NZP2 312 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 SLAMF8Q9P0V8 285 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 TAAR2Q9P1P5 351 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 PACSIN3Q9UKS6 424 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 TSC22D4Q9Y3Q8 395 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 GCN1Q92616 2671 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 WDFY3Q8IZQ1 3526 aa9.09□□□□□ -0.95
PDLIM5-223ENST00000627587 KIR2DS5A0A0G2JLQ3 304 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 A0A0G2JNG1 304 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 A0A1W2PP18 115 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 FEZF1A0PJY2 475 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 CCDC154A6NI56 674 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 H7BY64 318 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 KIR2DS3K7RE56 304 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 BTN3A3O00478 584 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 ENTPD5O75356 428 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 SH3BGRLO75368 114 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 MT-CO3P00414 261 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 VIPP01282 170 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 ALPPL2P10696 532 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 PIK3CBP42338 1070 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 DUSP3P51452 185 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 MTTPP55157 894 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 UBE2IP63279 158 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 PHC1P78364 1004 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 CSNK1G2P78368 415 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 ABATP80404 500 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 REEP5Q00765 189 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 ACSM2AQ08AH3 577 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 C1orf61Q13536 156 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 CEACAM7Q14002 265 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 KIR2DS5Q14953 304 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 PLCL1Q15111 1095 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 TBC1D25Q3MII6 688 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 PRRT3Q5FWE3 981 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 COQ5Q5HYK3 327 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 C6orf163Q5TEZ5 329 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 BROXQ5VW32 411 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 ACSM2BQ68CK6 577 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 NOXRED1Q6NXP6 359 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 HACD2Q6Y1H2 254 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 ZNF605Q86T29 641 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 HPS6Q86YV9 775 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 RIMKLAQ8IXN7 391 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 GLB1L3Q8NCI6 653 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 ZNF248Q8NDW4 579 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 ROPN1LQ96C74 230 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 PRAP1Q96NZ9 151 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 SERPINI1Q99574 410 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 ZBTB18Q99592 522 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 DPY30Q9C005 99 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 PITHD1Q9GZP4 211 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 CLMPQ9H6B4 373 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 POT1Q9NUX5 634 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms