RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 CCNI2Q6ZMN8 369 aaPredicted RBP3.56□□□□□ -1.84
LRRC39-204ENST00000620882 MIER3Q7Z3K6 550 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 RNF113BQ8IZP6 322 aaKnown RBP3.56□□□□□ -1.84
LRRC39-204ENST00000620882 RBMXL3Q8N7X1 1067 aaKnown RBP3.56□□□□□ -1.84
LRRC39-204ENST00000620882 GBP7Q8N8V2 638 aaPredicted RBP3.56□□□□□ -1.84
LRRC39-204ENST00000620882 ZNF114Q8NC26 417 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 C17orf47Q8NEP4 570 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 OR4K1Q8NGD4 311 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 TMEM255BQ8WV15 326 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 LIPHQ8WWY8 451 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 IRGQQ8WZA9 623 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 NT5C3BQ969T7 300 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 ZBTB9Q96C00 473 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 CDKN2AIPNLQ96HQ2 116 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 IFT74Q96LB3 600 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 NDNQ99608 321 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 RHOXF2Q9BQY4 288 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 PRRG4Q9BZD6 226 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 DCTPP1Q9H773 170 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 FANCEQ9HB96 536 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 PANK4Q9NVE7 773 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 SNX6Q9UNH7 406 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 NME7Q9Y5B8 376 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 PCDHAC2Q9Y5I4 1007 aa3.56□□□□□ -1.84
LRRC39-204ENST00000620882 CENPJQ9HC77 1338 aaPredicted RBP3.55□□□□□ -1.84
LRRC39-204ENST00000620882 OR6C74A6NCV1 312 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 ZNF716A6NP11 495 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 F8WDY8 70 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 DVL1O14640 695 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 ZNHIT1O43257 154 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 SPOPO43791 374 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 NUDT21O43809 227 aaKnown RBP3.55□□□□□ -1.84
LRRC39-204ENST00000620882 SERPINI2O75830 405 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 OR6B1O95007 311 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 SERPINA3P01011 423 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 ZNF735P0CB33 412 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 SP9P0CG40 484 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 FAM106CPP0CH98 169 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 PSG1P11464 419 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 ODC1P11926 461 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 KRT5P13647 590 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 B4GALT1P15291 398 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 ZNF24P17028 368 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 SSTR1P30872 391 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 GNL1P36915 607 aaPredicted RBP3.55□□□□□ -1.84
LRRC39-204ENST00000620882 HSD17B3P37058 310 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 HAAOP46952 286 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 SLC11A1P49279 550 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 PCYT1AP49585 367 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 PDLIM4P50479 330 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 FKBP1BP68106 108 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 MBTD1Q05BQ5 628 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 DPTQ07507 201 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 SPAG1Q07617 926 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 LCP2Q13094 533 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 SQLEQ14534 574 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 MAPK11Q15759 364 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 KRTAP15-1Q3LI76 137 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 ITPRIPL2Q3MIP1 535 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.55□□□□□ -1.84
LRRC39-204ENST00000620882 FAM171BQ6P995 826 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 COLCA1Q6ZS62 124 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 RTN4RL2Q86UN3 420 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 ZNF573Q86YE8 665 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 LAX1Q8IWV1 398 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 CCDC65Q8IXS2 484 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 KDM8Q8N371 416 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 OR14A16Q8NHC5 309 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 NTN5Q8WTR8 489 aaPredicted RBP3.55□□□□□ -1.84
LRRC39-204ENST00000620882 UBLCP1Q8WVY7 318 aaPredicted RBP3.55□□□□□ -1.84
LRRC39-204ENST00000620882 NAF1Q96HR8 494 aaKnown RBP3.55□□□□□ -1.84
LRRC39-204ENST00000620882 RPRD1AQ96P16 312 aaPredicted RBP3.55□□□□□ -1.84
LRRC39-204ENST00000620882 USP28Q96RU2 1077 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 ASCL2Q99929 193 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 MMTAG2Q9BU76 263 aaKnown RBP3.55□□□□□ -1.84
LRRC39-204ENST00000620882 CDK19Q9BWU1 502 aa3.55□□□□□ -1.84
LRRC39-204ENST00000620882 RBM38Q9H0Z9 239 aaKnown RBP3.55□□□□□ -1.84
LRRC39-204ENST00000620882 RPF1Q9H9Y2 349 aaKnown RBP3.55□□□□□ -1.84
LRRC39-204ENST00000620882 MRPS2Q9Y399 296 aaKnown RBP3.55□□□□□ -1.84
LRRC39-204ENST00000620882 A0A087X0K7 114 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 TRAV24A0A0B4J272 114 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 A0A1B0GWJ7 208 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 A0A1W2PN81 502 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 ASPDHA6ND91 283 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 ANKDD1BA6NHY2 528 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 LILRA5A6NI73 299 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 O00370 1275 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 RASGRF2O14827 1237 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 ADAM12O43184 909 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 IL1BP01584 269 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 TFAP2AP05549 437 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 CLUP10909 449 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 ZNF12P17014 697 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 ZNF3P17036 446 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 CHRNA7P36544 502 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 IER3P46695 156 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 TAF10Q12962 218 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 GAMTQ14353 236 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 NADK2Q4G0N4 442 aa3.54□□□□□ -1.84
LRRC39-204ENST00000620882 SPOUT1Q5T280 376 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms