RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 PRRT3Q5FWE3 981 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 TLDC1Q6P9B6 456 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 SYT13Q7L8C5 426 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 AMIGO1Q86WK6 493 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 ZNF687Q8N1G0 1237 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 KRT78Q8N1N4 520 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 CHCHD4Q8N4Q1 142 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 C16orf78Q8WTQ4 265 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 NCLNQ969V3 563 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 TESCQ96BS2 214 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 REPS1Q96D71 796 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 CXorf40BQ96DE9 158 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 WDR34Q96EX3 536 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 SCARF2Q96GP6 870 aaPredicted RBP7.45□□□□□ -1.22
NEK3-207ENST00000617054 ITCHQ96J02 903 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 AIF1LQ9BQI0 150 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 KCNH6Q9H252 994 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 KAT8Q9H7Z6 458 aaKnown RBP7.45□□□□□ -1.22
NEK3-207ENST00000617054 COQ10BQ9H8M1 238 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 SLC2A4RGQ9NR83 387 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 DUSP12Q9UNI6 340 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.45□□□□□ -1.22
NEK3-207ENST00000617054 MAGED1Q9Y5V3 778 aaPredicted RBP7.45□□□□□ -1.22
NEK3-207ENST00000617054 GSAPA4D1B5 854 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 CLIC1O00299 241 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 FOXE1O00358 373 aaPredicted RBP7.45□□□□□ -1.22
NEK3-207ENST00000617054 C6orf47O95873 294 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 PVRP15151 417 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 SLC7A1P30825 629 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 HBA1P69905 142 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 FOXM1Q08050 763 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 GAB1Q13480 694 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 GPR18Q14330 331 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 NKG7Q16617 165 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 SPIN4Q56A73 249 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 C6orf52Q5T4I8 152 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 ZCCHC8Q6NZY4 707 aaKnown RBP7.45□□□□□ -1.22
NEK3-207ENST00000617054 TSSK4Q6SA08 328 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 TAF8Q7Z7C8 310 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 PDSS2Q86YH6 399 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 TICAM1Q8IUC6 712 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 ADGRG5Q8IZF4 528 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 OR2L3Q8NG85 312 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 RMI1Q9H9A7 625 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 LHX9Q9NQ69 397 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 PRDM9Q9NQV7 894 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 BCAP29Q9UHQ4 241 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 ADGRE2Q9UHX3 823 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 DTNAQ9Y4J8 743 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 BDP1A6H8Y1 2624 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 ASXL3Q9C0F0 2248 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 TRBV5-3A0A0A0MS03 114 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 TCRBV5S2A0A599 114 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 OR6C74A6NCV1 312 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 NDUFS4O43181 175 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 SH3BP5O60239 455 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 NME6O75414 186 aaPredicted RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 ZCCHC18P0CG32 403 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 ALPPL2P10696 532 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 TYRP1P17643 537 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 NELFEP18615 380 aaKnown RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 PTX3P26022 381 aaPredicted RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 TEAD1P28347 426 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 CD6P30203 668 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 PKLRP30613 574 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 CCR3P51677 355 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 IST1P53990 364 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 CLNS1AP54105 237 aaKnown RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 EEFSECP57772 596 aaKnown RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 PCDH1Q08174 1060 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 ZNF763Q0D2J5 394 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 EIF2B5Q13144 721 aaKnown RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 ARHGAP19Q14CB8 494 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.44□□□□□ -1.22
NEK3-207ENST00000617054 OGFRL1Q5TC84 451 aaPredicted RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 KHDRBS2Q5VWX1 349 aaKnown RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 KIAA0895LQ68EN5 471 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 ZFP1Q6P2D0 407 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 SLC9B2Q86UD5 537 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 ABHD11Q8NFV4 315 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 FAM120BQ96EK7 910 aaKnown RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 FCRL1Q96LA6 429 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 ZNF717Q9BY31 904 aaPredicted RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 SLC6A16Q9GZN6 736 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 SRMSQ9H3Y6 488 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 EHD1Q9H4M9 534 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 RMND5AQ9H871 391 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 TEX10Q9NXF1 929 aaPredicted RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 RAPGEFL1Q9UHV5 662 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 PCDHB11Q9Y5F2 797 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 SNX8Q9Y5X2 465 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 IGHV1OR15-9A0A0B4J2B8 117 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 A0A1W2PS29 197 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 SERTM1A2A2V5 107 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 DYTNA2CJ06 578 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 C7orf72A4D263 438 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 PRAMEF26H0Y7S4 382 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 MAN2B1O00754 1011 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 SOCS2O14508 198 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms