RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 GALNT16Q8N428 558 aa11.97□□□□□ -0.49
CSTF1-208ENST00000613138 RBMXL3Q8N7X1 1067 aaKnown RBP11.97□□□□□ -0.49
CSTF1-208ENST00000613138 MVB12AQ96EY5 273 aa11.97□□□□□ -0.49
CSTF1-208ENST00000613138 IP6K3Q96PC2 410 aa11.97□□□□□ -0.49
CSTF1-208ENST00000613138 SLC6A16Q9GZN6 736 aa11.97□□□□□ -0.49
CSTF1-208ENST00000613138 RHBGQ9H310 441 aa11.97□□□□□ -0.49
CSTF1-208ENST00000613138 ZNF552Q9H707 407 aaPredicted RBP11.97□□□□□ -0.49
CSTF1-208ENST00000613138 ANKZF1Q9H8Y5 726 aa11.97□□□□□ -0.49
CSTF1-208ENST00000613138 ANKHQ9HCJ1 492 aa11.97□□□□□ -0.49
CSTF1-208ENST00000613138 MKKSQ9NPJ1 570 aaPredicted RBP11.97□□□□□ -0.49
CSTF1-208ENST00000613138 GPR83Q9NYM4 423 aa11.97□□□□□ -0.49
CSTF1-208ENST00000613138 NXT1Q9UKK6 140 aaKnown RBP11.97□□□□□ -0.49
CSTF1-208ENST00000613138 G3BP2Q9UN86 482 aaKnown RBP11.97□□□□□ -0.49
CSTF1-208ENST00000613138 CDC14AQ9UNH5 594 aa11.97□□□□□ -0.49
CSTF1-208ENST00000613138 CHST10O43529 356 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 KLHL41O60662 606 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 GALR3O60755 368 aaPredicted RBP11.96□□□□□ -0.49
CSTF1-208ENST00000613138 SBK3P0C264 359 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 SMIM10L1P0DMW3 83 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 ALOX12P18054 663 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 GNAZP19086 355 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 ITGA3P26006 1051 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 AHRP35869 848 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 RRADP55042 308 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 TLE1Q04724 770 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 PCOLCEQ15113 449 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 TUBB8Q3ZCM7 444 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 MINDY4Q4G0A6 757 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 TMIGD1Q6UXZ0 262 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 CEP128Q6ZU80 1094 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 TCAIMQ8N3R3 496 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 TEX9Q8N6V9 391 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 UBTD2Q8WUN7 234 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 ISL2Q96A47 359 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 PHF21BQ96EK2 531 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 SMIM10Q96HG1 83 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 SCYL1Q96KG9 808 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 NSUN5Q96P11 429 aaKnown RBP11.96□□□□□ -0.49
CSTF1-208ENST00000613138 TGIF2Q9GZN2 237 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 LANCL2Q9NS86 450 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 SEMA3GQ9NS98 782 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 TBK1Q9UHD2 729 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 PCDHGA9Q9Y5G4 932 aaKnown RBP11.96□□□□□ -0.49
CSTF1-208ENST00000613138 SLC22A7Q9Y694 548 aa11.96□□□□□ -0.49
CSTF1-208ENST00000613138 A0A1B0GTL3 188 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 MYOCOSA0A1B0GUC4 107 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 H0YIG0 161 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 GOLGA8RI6L899 631 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 SAP18O00422 153 aaKnown RBP11.95□□□□□ -0.5
CSTF1-208ENST00000613138 RTCAO00442 366 aaKnown RBP11.95□□□□□ -0.5
CSTF1-208ENST00000613138 B4GALT2O60909 372 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 ABHD2P08910 425 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 GFAPP14136 432 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 ACPPP15309 386 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 PIK3CGP48736 1102 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 HNRNPFP52597 415 aaKnown RBP11.95□□□□□ -0.5
CSTF1-208ENST00000613138 BTN3A2P78410 334 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 BTG2P78543 158 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 RHAGQ02094 409 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 RGS1Q08116 209 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 PWP1Q13610 501 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 RUNX2Q13950 521 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 SETDB1Q15047 1291 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 ACAP2Q15057 778 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 FAM83EQ2M2I3 478 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 CDKL4Q5MAI5 379 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 TRMT10CQ7L0Y3 403 aaKnown RBP11.95□□□□□ -0.5
CSTF1-208ENST00000613138 LRRC70Q7Z2Q7 622 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 PTGR2Q8N8N7 351 aaPredicted RBP11.95□□□□□ -0.5
CSTF1-208ENST00000613138 CLEC1AQ8NC01 280 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 TMEM52Q8NDY8 209 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 NACC2Q96BF6 587 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 THOC3Q96J01 351 aaKnown RBP11.95□□□□□ -0.5
CSTF1-208ENST00000613138 VPS50Q96JG6 964 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 FER1L6-AS2Q96M78 137 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 F2RL3Q96RI0 385 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 SMAD5Q99717 465 aaKnown RBP11.95□□□□□ -0.5
CSTF1-208ENST00000613138 SORBS1Q9BX66 1292 aaKnown RBP11.95□□□□□ -0.5
CSTF1-208ENST00000613138 TSPYL1Q9H0U9 437 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 ATP13A2Q9NQ11 1180 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 C14orf105Q9NVL8 296 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 XPR1Q9UBH6 696 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 OPTCQ9UBM4 332 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 IKBKGQ9Y6K9 419 aa11.95□□□□□ -0.5
CSTF1-208ENST00000613138 RP1L1Q8IWN7 2480 aaPredicted RBP11.95□□□□□ -0.5
CSTF1-208ENST00000613138 IGHV1-45A0A0A0MS14 117 aa11.94□□□□□ -0.5
CSTF1-208ENST00000613138 SMIM23A6NLE4 172 aa11.94□□□□□ -0.5
CSTF1-208ENST00000613138 TGFBR3LH3BV60 316 aa11.94□□□□□ -0.5
CSTF1-208ENST00000613138 K7EPI3 171 aa11.94□□□□□ -0.5
CSTF1-208ENST00000613138 PPP6CO00743 305 aa11.94□□□□□ -0.5
CSTF1-208ENST00000613138 PRPF4O43172 522 aaKnown RBP eCLIP11.94□□□□□ -0.5
CSTF1-208ENST00000613138 ERI3O43414 337 aaKnown RBP11.94□□□□□ -0.5
CSTF1-208ENST00000613138 KLK8O60259 260 aa11.94□□□□□ -0.5
CSTF1-208ENST00000613138 H2AFYO75367 372 aaKnown RBP11.94□□□□□ -0.5
CSTF1-208ENST00000613138 IPO13O94829 963 aaKnown RBP11.94□□□□□ -0.5
CSTF1-208ENST00000613138 SEC24DO94855 1032 aaPredicted RBP11.94□□□□□ -0.5
CSTF1-208ENST00000613138 F10P00742 488 aa11.94□□□□□ -0.5
CSTF1-208ENST00000613138 SERPINA6P08185 405 aa11.94□□□□□ -0.5
CSTF1-208ENST00000613138 ITGAMP11215 1152 aa11.94□□□□□ -0.5
CSTF1-208ENST00000613138 PCNAP12004 261 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms