RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 KPNA5O15131 536 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 RAP2AP10114 183 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 HNMTP50135 292 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 LAIR1Q6GTX8 287 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 METTL2BQ6P1Q9 378 aaKnown RBP15.87■□□□□ 0.13
CNOT3-208ENST00000613073 TMEM179BQ7Z7N9 219 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 CACUL1Q86Y37 369 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 LACC1Q8IV20 430 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 VN1R2Q8NFZ6 395 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 LRIG1Q96JA1 1093 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 ASB16Q96NS5 453 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 ZBTB18Q99592 522 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 IGFLR1Q9H665 355 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 VAPAQ9P0L0 249 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.87■□□□□ 0.13
CNOT3-208ENST00000613073 PLXNA2O75051 1894 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 ISPDA4D126 451 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 CENPXA8MT69 81 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 SPINT1O43278 529 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 DFNA5O60443 496 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 SLCO2B1O94956 709 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 BCKDHAP12694 445 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 BDKRB1P46663 353 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 PFN3P60673 137 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 CHRNEQ04844 493 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 KIAA0040Q15053 153 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 ZNF404Q494X3 552 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 SOWAHCQ53LP3 525 aaPredicted RBP15.87■□□□□ 0.13
CNOT3-208ENST00000613073 C9orf64Q5T6V5 341 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 ELMOD2Q8IZ81 293 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 TCAIMQ8N3R3 496 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 WFIKKN2Q8TEU8 576 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 SLC13A3Q8WWT9 602 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 ARRDC3Q96B67 414 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 PRM3Q9NNZ6 103 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 DNAJC11Q9NVH1 559 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 LIMD1Q9UGP4 676 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 SLC27A6Q9Y2P4 619 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 AGAP5A6NIR3 686 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 BCKDKO14874 412 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 ATG13O75143 517 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 PRSS23O95084 383 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 P2RX3P56373 397 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 CHIT1Q13231 466 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 MAD2L1Q13257 205 aaPredicted RBP15.87■□□□□ 0.13
CNOT3-208ENST00000613073 MAPKAPK3Q16644 382 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 GAB4Q2WGN9 574 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 DPP10Q8N608 796 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 IL17RDQ8NFM7 739 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 TIFAQ96CG3 184 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 TSSK3Q96PN8 268 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 SLC29A3Q9BZD2 475 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 RNF167Q9H6Y7 350 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 MAU2Q9Y6X3 613 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 MMP20O60882 483 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 AP2A2O94973 939 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 LRATO95237 230 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 PRNPP04156 253 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 GRK3P35626 688 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 PBX2P40425 430 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 SP140Q13342 867 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 ZNF234Q14588 700 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 ZNF181Q2M3W8 571 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 CDKL4Q5MAI5 379 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 TPRG1LQ5T0D9 272 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 SLX4IPQ5VYV7 408 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 CES5AQ6NT32 575 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 B3GNT8Q7Z7M8 397 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 PARP16Q8N5Y8 322 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 TP53I13Q8NBR0 393 aaPredicted RBP15.86■□□□□ 0.13
CNOT3-208ENST00000613073 ZNF540Q8NDQ6 660 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 SMARCD2Q92925 531 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 COQ7Q99807 217 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 TBCDQ9BTW9 1192 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 BEX2Q9BXY8 128 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 RIBC2Q9H4K1 309 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 QPCTLQ9NXS2 382 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 C2orf16Q68DN1 1984 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 KCNE1BA0A087WTH5 132 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 ERVH48-1M5A8F1 160 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 MEN1O00255 615 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 SH3BGRLO75368 114 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 RECQL5O94762 991 aaPredicted RBP15.86■□□□□ 0.13
CNOT3-208ENST00000613073 NFATC1O95644 943 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 B3GALT4O96024 378 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 NTRK1P04629 796 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 PGRP06401 933 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 PRKACBP22694 351 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 TACR1P25103 407 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 PPP2R2BQ00005 443 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 NAE1Q13564 534 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 PWP1Q13610 501 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 DDX39BQ13838 428 aaKnown RBP15.86■□□□□ 0.13
CNOT3-208ENST00000613073 CDK10Q15131 360 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 USP39Q53GS9 565 aaKnown RBP15.86■□□□□ 0.13
CNOT3-208ENST00000613073 CHCHD4Q8N4Q1 142 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 LMNTD1Q8N9Z9 388 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 APIPQ96GX9 242 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 MED30Q96HR3 178 aa15.86■□□□□ 0.13
CNOT3-208ENST00000613073 EGLN2Q96KS0 407 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms