RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	C2orf27A	Q580R0	203 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	PRAMEF14	Q5SWL7	426 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	PRAMEF13	Q5VWM6	474 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	OR9Q2	Q8NGE9	314 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	GEMIN6	Q8WXD5	167 aa	Known RBP	13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	BIRC8	Q96P09	236 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	SLC30A2	Q9BRI3	323 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	SLITRK2	Q9H156	845 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	EHD1	Q9H4M9	534 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	HCN4	Q9Y3Q4	1203 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	SPAG17	Q6Q759	2223 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571		A0A075B6Q4	140 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571		A0A1W2PPK0	400 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	FAM86C2P	A6NEL3	165 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	MATN4	O95460	622 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	NPPA	P01160	153 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	RB1	P06400	928 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	SLC2A2	P11168	524 aa	Predicted RBP	13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	TYR	P14679	529 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	TCEA1	P23193	301 aa	Known RBP	13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	ARNT	P27540	789 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	MVK	Q03426	396 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	C10orf62	Q5T681	223 aa	Predicted RBP	13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	FAM171B	Q6P995	826 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	HSDL2	Q6YN16	418 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	GET4	Q7L5D6	327 aa	Predicted RBP	13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	DCP2	Q8IU60	420 aa	Known RBP	13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	SCAI	Q8N9R8	606 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	TRUB1	Q8WWH5	349 aa	Known RBP	13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	UBXN10	Q96LJ8	280 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	PHOX2B	Q99453	314 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	TTYH2	Q9BSA4	534 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	FAIM	Q9NVQ4	179 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	DUS2	Q9NX74	493 aa	Known RBP	13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	TPR	P12270	2363 aa	Known RBP	13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	CA12	O43570	354 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	NDUFB5	O43674	189 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	INHBC	P55103	352 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	SEC13	P55735	322 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	TMEM115	Q12893	351 aa	Predicted RBP	13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	NOG	Q13253	232 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	ATG9B	Q674R7	924 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	ANKRD34A	Q69YU3	496 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	SHF	Q7M4L6	423 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	NAGS	Q8N159	534 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	PIK3R3	Q92569	461 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	C17orf62	Q9BQA9	187 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	IFT27	Q9BW83	186 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	UCK2	Q9BZX2	261 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	FAM120C	Q9NX05	1096 aa	Known RBP	13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	SPATA7	Q9P0W8	599 aa		13.37	□□□□□ -0.27
MUC1-223	ENST00000611571	TMX2-CTNND1	H3BSU7	103 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	KIAA0513	O60268	411 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	LEFTY1	O75610	366 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	NR4A2	P43354	598 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	PPIG	Q13427	754 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	SPCS2	Q15005	226 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	WSCD2	Q2TBF2	565 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	RNF111	Q6ZNA4	994 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	PGBD5	Q8N414	524 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	MEIOB	Q8N635	442 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	OR6K6	Q8NGW6	343 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	SNX33	Q8WV41	574 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	DNAJA3	Q96EY1	480 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	EFCAB11	Q9BUY7	163 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	IL17C	Q9P0M4	197 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	TNFRSF10B	O14763	440 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	SLC16A8	O95907	504 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	PRNP	P04156	253 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	HOXB6	P17509	224 aa	Known RBP	13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	PPM1A	P35813	382 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	RHAG	Q02094	409 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	SLC3A1	Q07837	685 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	HNRNPA0	Q13151	305 aa	Known RBP	13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	ZDHHC20	Q5W0Z9	365 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	FAM86B1	Q8N7N1	296 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	UBE2F	Q969M7	185 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	KCNK12	Q9HB15	430 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	SOHLH2	Q9NX45	425 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	HSPB11	Q9Y547	144 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	SESN1	Q9Y6P5	492 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	KRBA1	A5PL33	1030 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571		H0YJX3	145 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	SMIM18	P0DKX4	95 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	LGALS3BP	Q08380	585 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	ZNHIT3	Q15649	155 aa	Predicted RBP	13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	RUNDC3A	Q59EK9	446 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	HLA-DQA1	Q5Y7H0	255 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	ZNF551	Q7Z340	670 aa	Predicted RBP	13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	GALNT12	Q8IXK2	581 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	TMEM151A	Q8N4L1	468 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	POMGNT2	Q8NAT1	580 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	PIGX	Q8TBF5	258 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	LCN9	Q8WX39	176 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	RERG	Q96A58	199 aa	Predicted RBP	13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	KCTD7	Q96MP8	289 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	ZNF510	Q9Y2H8	683 aa		13.36	□□□□□ -0.27
MUC1-223	ENST00000611571	PCP4L1	A6NKN8	68 aa		13.35	□□□□□ -0.27
MUC1-223	ENST00000611571	ZNF195	O14628	629 aa		13.35	□□□□□ -0.27
MUC1-223	ENST00000611571	PFKL	P17858	780 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms