RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 SPENQ96T58 3664 aaKnown RBP13.69□□□□□ -0.22
HDDC2-204ENST00000608295 TENM4Q6N022 2769 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 A0A087X1B8 175 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 IGHV1-45A0A0A0MS14 117 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 GALR3O60755 368 aaPredicted RBP13.68□□□□□ -0.22
HDDC2-204ENST00000608295 B4GALT2O60909 372 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 KERAO60938 352 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 WISP1O95388 367 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 TUBB4AP04350 444 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 FAM153BP0C7A2 387 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 PCNAP12004 261 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 CD22P20273 847 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 HNRNPH1P31943 449 aaKnown RBP13.68□□□□□ -0.22
HDDC2-204ENST00000608295 HYAL2Q12891 473 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 ILF2Q12905 390 aaKnown RBP13.68□□□□□ -0.22
HDDC2-204ENST00000608295 PWP1Q13610 501 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 DOC2AQ14183 400 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 HERC3Q15034 1050 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 PCOLCEQ15113 449 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 FAM153CQ494X1 144 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 JMJD6Q6NYC1 403 aaPredicted RBP13.68□□□□□ -0.22
HDDC2-204ENST00000608295 ABHD13Q7L211 337 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 PLD6Q8N2A8 252 aaKnown RBP13.68□□□□□ -0.22
HDDC2-204ENST00000608295 STAG3L4Q8TBR4 150 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 NT5CQ8TCD5 201 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 BRIX1Q8TDN6 353 aaKnown RBP13.68□□□□□ -0.22
HDDC2-204ENST00000608295 SLC44A1Q8WWI5 657 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 METTL21AQ8WXB1 218 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 SCYL1Q96KG9 808 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 ILKAPQ9H0C8 392 aaPredicted RBP13.68□□□□□ -0.22
HDDC2-204ENST00000608295 PTGFRNQ9P2B2 879 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 OPTCQ9UBM4 332 aa13.68□□□□□ -0.22
HDDC2-204ENST00000608295 PTBP2Q9UKA9 531 aaKnown RBP13.68□□□□□ -0.22
HDDC2-204ENST00000608295 EXOC1LA0A1B0GW35 172 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 TRIM49D1C9J1S8 452 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 ERI3O43414 337 aaKnown RBP13.67□□□□□ -0.22
HDDC2-204ENST00000608295 CHST10O43529 356 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 H2AFYO75367 372 aaKnown RBP13.67□□□□□ -0.22
HDDC2-204ENST00000608295 IPO13O94829 963 aaKnown RBP13.67□□□□□ -0.22
HDDC2-204ENST00000608295 EPORP19235 508 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 AHRP35869 848 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 ARL1P40616 181 aaPredicted RBP13.67□□□□□ -0.22
HDDC2-204ENST00000608295 MSH2P43246 934 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 UQCRFS1P47985 274 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 PLA2G16P53816 162 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 BTN3A2P78410 334 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 IRF8Q02556 426 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 CHIT1Q13231 466 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 DDX39BQ13838 428 aaKnown RBP13.67□□□□□ -0.22
HDDC2-204ENST00000608295 ABRAXAS2Q15018 415 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 PFKFB4Q16877 469 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 FAM219BQ5XKK7 198 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 ATG9BQ674R7 924 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 B3GNTL1Q67FW5 361 aaPredicted RBP13.67□□□□□ -0.22
HDDC2-204ENST00000608295 TMIGD1Q6UXZ0 262 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 LRRC70Q7Z2Q7 622 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 IFT20Q8IY31 132 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 KLHDC8AQ8IYD2 350 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 KRT78Q8N1N4 520 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 RNF175Q8N4F7 328 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 TEX9Q8N6V9 391 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 Q8NA96 180 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 TRPV3Q8NET8 790 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 CPT1CQ8TCG5 803 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 VPS50Q96JG6 964 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 FAM129AQ9BZQ8 928 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 CD244Q9BZW8 370 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 TGIF2Q9GZN2 237 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 SLC6A16Q9GZN6 736 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 LHPPQ9H008 270 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 CLMPQ9H6B4 373 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 RIC8BQ9NVN3 520 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 SLC22A7Q9Y694 548 aa13.67□□□□□ -0.22
HDDC2-204ENST00000608295 CPAMD8Q8IZJ3 1885 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 A0A087WUV0 522 aaPredicted RBP13.66□□□□□ -0.22
HDDC2-204ENST00000608295 FAM227AF5H4B4 570 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 PRR35P0CG20 571 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 ITGAMP11215 1152 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 KCNC4Q03721 635 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 FAM83EQ2M2I3 478 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 BTBD16Q32M84 506 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 AGAP7PQ5VUJ5 663 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 FCRLBQ6BAA4 426 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 KLC3Q6P597 504 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 NDUFAF7Q7L592 441 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 TAOK1Q7L7X3 1001 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 VN1R5Q7Z5H4 357 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 ANKRD37Q7Z713 158 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 RELL1Q8IUW5 271 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 KBTBD2Q8IY47 623 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 CYP4X1Q8N118 509 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 ZADH2Q8N4Q0 377 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 AFAP1L2Q8N4X5 818 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 EFCAB3Q8N7B9 438 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 FAM47BQ8NA70 645 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 CREB3L4Q8TEY5 395 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 DCAKDQ8WVC6 231 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 SREK1Q8WXA9 508 aaKnown RBP13.66□□□□□ -0.22
HDDC2-204ENST00000608295 AGAP4Q96P64 663 aa13.66□□□□□ -0.22
HDDC2-204ENST00000608295 SARGQ9BW04 601 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms