RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 SPATA19Q7Z5L4 167 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 PRPF39Q86UA1 669 aaKnown RBP6.91□□□□□ -1.3
TUBE1-207ENST00000604689 TMEM200AQ86VY9 491 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 ZNF610Q8N9Z0 462 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 NUDT10Q8NFP7 164 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 CNBD2Q96M20 576 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 RBM15Q96T37 977 aaKnown RBP eCLIP6.91□□□□□ -1.3
TUBE1-207ENST00000604689 POTEKPQ9BYX7 375 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 GFOD1Q9NXC2 390 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 MMACHCQ9Y4U1 282 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 UMODL1Q5DID0 1318 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 LTBP1Q14766 1721 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 FAM187AA6NFU0 413 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 PDZK1P1A8MUH7 402 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 E9PI62 339 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 TRIM24O15164 1050 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 NPR2P20594 1047 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 MSR1P21757 451 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 TYK2P29597 1187 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 DLSTP36957 453 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 TGFBR2P37173 567 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 GNA12Q03113 381 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 RPL13AP3Q6NVV1 102 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 SCARA5Q6ZMJ2 495 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 DPPA4Q7L190 304 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 THEM5Q8N1Q8 247 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 ARHGEF39Q8N4T4 335 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 OR2T34Q8NGX1 318 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 HASPINQ8TF76 798 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 NSUN4Q96CB9 384 aaKnown RBP6.91□□□□□ -1.3
TUBE1-207ENST00000604689 TSPAN17Q96FV3 270 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 TMEM80Q96HE8 168 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 NSL1Q96IY1 281 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 LMF1Q96S06 567 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 DNTTIP1Q9H147 329 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 MUC13Q9H3R2 512 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 LRRC40Q9H9A6 602 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 ABCD2Q9UBJ2 740 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 ZNHIT2Q9UHR6 403 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 TRMT112Q9UI30 125 aaKnown RBP6.91□□□□□ -1.3
TUBE1-207ENST00000604689 AGO1Q9UL18 857 aaKnown RBP6.91□□□□□ -1.3
TUBE1-207ENST00000604689 CCDC88AQ3V6T2 1871 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 BTN3A3O00478 584 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 DEAF1O75398 565 aaPredicted RBP6.91□□□□□ -1.3
TUBE1-207ENST00000604689 NSA2O95478 260 aaKnown RBP6.91□□□□□ -1.3
TUBE1-207ENST00000604689 C22orf31O95567 290 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 TTLL1O95922 423 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 PLS3P13797 630 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 BGNP21810 368 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 DTYMKP23919 212 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 RGS8P57771 180 aaPredicted RBP6.91□□□□□ -1.3
TUBE1-207ENST00000604689 PPATQ06203 517 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 LCP2Q13094 533 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 FADDQ13158 208 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 TRIP10Q15642 601 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 KNOP1Q1ED39 458 aaKnown RBP6.91□□□□□ -1.3
TUBE1-207ENST00000604689 FASTKD1Q53R41 847 aaKnown RBP6.91□□□□□ -1.3
TUBE1-207ENST00000604689 ANGEL2Q5VTE6 544 aaKnown RBP6.91□□□□□ -1.3
TUBE1-207ENST00000604689 SLC22A10Q63ZE4 541 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 CDC73Q6P1J9 531 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 SLC24A5Q71RS6 500 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 ANKRD46Q86W74 232 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 ARMC8Q8IUR7 673 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 VGLL2Q8N8G2 317 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 PIWIL2Q8TC59 973 aaKnown RBP6.91□□□□□ -1.3
TUBE1-207ENST00000604689 ACOT11Q8WXI4 607 aaPredicted RBP6.91□□□□□ -1.3
TUBE1-207ENST00000604689 DNAJC19Q96DA6 116 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 FER1L6-AS2Q96M78 137 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 SOX7Q9BT81 388 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 MECRQ9BV79 373 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 OR51V1Q9H2C8 321 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 NMUR1Q9HB89 426 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 POT1Q9NUX5 634 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 STOML2Q9UJZ1 356 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 DAPP1Q9UN19 280 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 PTRH2Q9Y3E5 179 aaKnown RBP6.91□□□□□ -1.3
TUBE1-207ENST00000604689 RIPK3Q9Y572 518 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 FKBP7Q9Y680 259 aa6.91□□□□□ -1.3
TUBE1-207ENST00000604689 ABCB11O95342 1321 aa6.9□□□□□ -1.3
TUBE1-207ENST00000604689 MROH7Q68CQ1 1323 aa6.9□□□□□ -1.3
TUBE1-207ENST00000604689 A0A0A6YYK5 440 aaPredicted RBP6.9□□□□□ -1.3
TUBE1-207ENST00000604689 CD3EAPO15446 510 aaKnown RBP6.9□□□□□ -1.3
TUBE1-207ENST00000604689 NPHS1O60500 1241 aa6.9□□□□□ -1.3
TUBE1-207ENST00000604689 MYL2P10916 166 aa6.9□□□□□ -1.3
TUBE1-207ENST00000604689 TYMPP19971 482 aa6.9□□□□□ -1.3
TUBE1-207ENST00000604689 CBLP22681 906 aa6.9□□□□□ -1.3
TUBE1-207ENST00000604689 CDKN1BP46527 198 aa6.9□□□□□ -1.3
TUBE1-207ENST00000604689 YAP1P46937 504 aaKnown RBP6.9□□□□□ -1.3
TUBE1-207ENST00000604689 BMXP51813 675 aa6.9□□□□□ -1.3
TUBE1-207ENST00000604689 BCAT1P54687 386 aa6.9□□□□□ -1.3
TUBE1-207ENST00000604689 IRX4P78413 519 aa6.9□□□□□ -1.3
TUBE1-207ENST00000604689 FAM83EQ2M2I3 478 aa6.9□□□□□ -1.3
TUBE1-207ENST00000604689 EIF2S3LQ2VIR3 472 aaKnown RBP6.9□□□□□ -1.3
TUBE1-207ENST00000604689 MBLAC2Q68D91 279 aa6.9□□□□□ -1.3
TUBE1-207ENST00000604689 GPBP1Q86WP2 473 aa6.9□□□□□ -1.3
TUBE1-207ENST00000604689 ERI1Q8IV48 349 aaKnown RBP6.9□□□□□ -1.3
TUBE1-207ENST00000604689 SVOPQ8N4V2 548 aa6.9□□□□□ -1.3
TUBE1-207ENST00000604689 OR6Y1Q8NGX8 325 aa6.9□□□□□ -1.3
TUBE1-207ENST00000604689 CHPT1Q8WUD6 406 aa6.9□□□□□ -1.3
TUBE1-207ENST00000604689 WFDC12Q8WWY7 111 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms