RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 CLGNO14967 610 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 SLU7O95391 586 aaKnown RBP14.89□□□□□ -0.03
RPS28-203ENST00000600659 SERPIND1P05546 499 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 COX6A1P12074 109 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 XCR1P46094 333 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 ALDH18A1P54886 795 aaKnown RBP14.89□□□□□ -0.03
RPS28-203ENST00000600659 SOX8P57073 446 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 RAB8AP61006 207 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 RGS1Q08116 209 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 C19orf57Q0VDD7 668 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 Q0VFX4 171 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 CHIT1Q13231 466 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 HERC3Q15034 1050 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 TSNAXIP1Q2TAA8 658 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 DEFB134Q4QY38 66 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 LACTB2Q53H82 288 aaPredicted RBP14.89□□□□□ -0.03
RPS28-203ENST00000600659 XKR6Q5GH73 641 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 KLC3Q6P597 504 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 TMEM205Q6UW68 189 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 SH2D5Q6ZV89 423 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 TBC1D19Q8N5T2 526 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.89□□□□□ -0.03
RPS28-203ENST00000600659 C8orf44Q96CB5 159 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 MTBPQ96DY7 904 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 VN1R1Q9GZP7 353 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 RHBGQ9H310 441 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 LANCL2Q9NS86 450 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 PSMC3IPQ9P2W1 217 aaPredicted RBP14.89□□□□□ -0.03
RPS28-203ENST00000600659 OPTCQ9UBM4 332 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 LOC102723996A0A087X1L8 192 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 LRIT2A6NDA9 550 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 OR2W5A6NFC9 320 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 FOXO6A8MYZ6 492 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 CLEC3AO75596 197 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 IGHEP01854 428 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 GFAPP14136 432 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 CXCR2P25025 360 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 GSTM2P28161 218 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 RRADP55042 308 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 OLR1P78380 273 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 IRF8Q02556 426 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 RBBP7Q16576 425 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 TOR1AIP1Q5JTV8 583 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 PTRH1Q86Y79 214 aaKnown RBP14.88□□□□□ -0.03
RPS28-203ENST00000600659 LAS2Q8IYD9 372 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 CYP4X1Q8N118 509 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 KRT78Q8N1N4 520 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 TEX9Q8N6V9 391 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 PTGR2Q8N8N7 351 aaPredicted RBP14.88□□□□□ -0.03
RPS28-203ENST00000600659 AENQ8WTP8 325 aaKnown RBP14.88□□□□□ -0.03
RPS28-203ENST00000600659 MS4A6EQ96DS6 147 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 SEC16BQ96JE7 1060 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 FER1L6-AS2Q96M78 137 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 SMAD5Q99717 465 aaKnown RBP14.88□□□□□ -0.03
RPS28-203ENST00000600659 EFCAB11Q9BUY7 163 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 SLC25A23Q9BV35 468 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 ZBTB26Q9HCK0 441 aa14.88□□□□□ -0.03
RPS28-203ENST00000600659 CPSF2Q9P2I0 782 aaKnown RBP14.88□□□□□ -0.03
RPS28-203ENST00000600659 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.88□□□□□ -0.03
RPS28-203ENST00000600659 V9GYY5 206 aaPredicted RBP14.88□□□□□ -0.03
RPS28-203ENST00000600659 HELZ2Q9BYK8 2649 aaKnown RBP14.87□□□□□ -0.03
RPS28-203ENST00000600659 PEX12O00623 359 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 SUV39H1O43463 412 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 H2AFYO75367 372 aaKnown RBP14.87□□□□□ -0.03
RPS28-203ENST00000600659 RPS17P08708 135 aaKnown RBP14.87□□□□□ -0.03
RPS28-203ENST00000600659 RBP1P09455 135 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 HNF4AP41235 474 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 EMP2P54851 167 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 RHAGQ02094 409 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 PCOLCEQ15113 449 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 TUBB8Q3ZCM7 444 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 GRHL2Q6ISB3 625 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 GOLGA7Q7Z5G4 137 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 TDRPQ86YL5 185 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 GALNT16Q8N428 558 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 TTLQ8NG68 377 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 ZNF473Q8WTR7 871 aaKnown RBP14.87□□□□□ -0.03
RPS28-203ENST00000600659 UBLCP1Q8WVY7 318 aaPredicted RBP14.87□□□□□ -0.03
RPS28-203ENST00000600659 GAL3ST3Q96A11 431 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 PEX11GQ96HA9 241 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 QRFPRQ96P65 431 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 MRPL57Q9BQC6 102 aaKnown RBP14.87□□□□□ -0.03
RPS28-203ENST00000600659 YIPF2Q9BWQ6 316 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 RBCK1Q9BYM8 510 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 MRPL46Q9H2W6 279 aaKnown RBP14.87□□□□□ -0.03
RPS28-203ENST00000600659 ZNF552Q9H707 407 aaPredicted RBP14.87□□□□□ -0.03
RPS28-203ENST00000600659 TMEM216Q9P0N5 145 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 PCTPQ9UKL6 214 aa14.87□□□□□ -0.03
RPS28-203ENST00000600659 RELNP78509 3460 aa14.86□□□□□ -0.03
RPS28-203ENST00000600659 IGHV1-45A0A0A0MS14 117 aa14.86□□□□□ -0.03
RPS28-203ENST00000600659 A0A0G2JN53 185 aa14.86□□□□□ -0.03
RPS28-203ENST00000600659 A0A1W2PPM1 405 aa14.86□□□□□ -0.03
RPS28-203ENST00000600659 A6NL46 340 aa14.86□□□□□ -0.03
RPS28-203ENST00000600659 A8MT66 165 aa14.86□□□□□ -0.03
RPS28-203ENST00000600659 STX16-NPEPL1H3BU86 382 aa14.86□□□□□ -0.03
RPS28-203ENST00000600659 OR7A17O14581 309 aa14.86□□□□□ -0.03
RPS28-203ENST00000600659 STX16O14662 325 aa14.86□□□□□ -0.03
RPS28-203ENST00000600659 CHST10O43529 356 aa14.86□□□□□ -0.03
RPS28-203ENST00000600659 ACPPP15309 386 aa14.86□□□□□ -0.03
RPS28-203ENST00000600659 EPB42P16452 691 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms