RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 MID1IP1Q9NPA3 183 aa17.95■□□□□ 0.46
CCDC9-205ENST00000600117 RUVBL1Q9Y265 456 aaKnown RBP17.95■□□□□ 0.46
CCDC9-205ENST00000600117 TSC22D4Q9Y3Q8 395 aa17.95■□□□□ 0.46
CCDC9-205ENST00000600117 PCDHB3Q9Y5E6 796 aa17.95■□□□□ 0.46
CCDC9-205ENST00000600117 SCRG1O75711 98 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 MED26O95402 600 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 ESRRBO95718 433 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 CHRNGP07510 517 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 CHN1P15882 459 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 NR1D1P20393 614 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 BGNP21810 368 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 GSTM2P28161 218 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 SLC5A2P31639 672 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 SERPINB5P36952 375 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 ARL1P40616 181 aaPredicted RBP17.94■□□□□ 0.46
CCDC9-205ENST00000600117 SNRPNP63162 240 aaKnown RBP17.94■□□□□ 0.46
CCDC9-205ENST00000600117 HYAL2Q12891 473 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 HSP90B2PQ58FF3 399 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 ARL13AQ5H913 290 aaPredicted RBP17.94■□□□□ 0.46
CCDC9-205ENST00000600117 TLDC1Q6P9B6 456 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 TMEM126BQ8IUX1 230 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 GPR135Q8IZ08 494 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 CAMKVQ8NCB2 501 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 TRPV3Q8NET8 790 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 TTLQ8NG68 377 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 SLC13A3Q8WWT9 602 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 SEC16BQ96JE7 1060 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 MAGEB10Q96LZ2 347 aaPredicted RBP17.94■□□□□ 0.46
CCDC9-205ENST00000600117 C10orf90Q96M02 699 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 CCNL2Q96S94 520 aaPredicted RBP17.94■□□□□ 0.46
CCDC9-205ENST00000600117 AICDAQ9GZX7 198 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 PCDHGA11Q9Y5H2 935 aa17.94■□□□□ 0.46
CCDC9-205ENST00000600117 SDK2Q58EX2 2172 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 FFAR3O14843 346 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 GPR42O15529 346 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 NDUFS4O43181 175 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 ZNF749O43361 778 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 CLEC3AO75596 197 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 DLGAP3O95886 979 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 EMP3P54852 163 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 GALNT1Q10472 559 aaPredicted RBP17.93■□□□□ 0.46
CCDC9-205ENST00000600117 PWP1Q13610 501 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 GRM7Q14831 915 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 LINC00303Q3SY05 128 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 TMEM164Q5U3C3 297 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 CDYL2Q8N8U2 506 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 SLC38A9Q8NBW4 561 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 PPP1R14CQ8TAE6 165 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 ZNF473Q8WTR7 871 aaKnown RBP17.93■□□□□ 0.46
CCDC9-205ENST00000600117 KCNA7Q96RP8 456 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 SLC29A3Q9BZD2 475 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 SHCBP1LQ9BZQ2 653 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 SLC6A16Q9GZN6 736 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 IRAK4Q9NWZ3 460 aa17.93■□□□□ 0.46
CCDC9-205ENST00000600117 MRPS2Q9Y399 296 aaKnown RBP17.93■□□□□ 0.46
CCDC9-205ENST00000600117 TMEM184BQ9Y519 407 aaPredicted RBP17.93■□□□□ 0.46
CCDC9-205ENST00000600117 HYKKA2RU49 373 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 ANKDD1BA6NHY2 528 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 TMEM114B3SHH9 223 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 TXNDC9O14530 226 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 ITM2AO43736 263 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 STK17BO94768 372 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 KIAA0754O94854 1291 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 ENO1P06733 434 aaKnown RBP17.92■□□□□ 0.46
CCDC9-205ENST00000600117 CAPN1P07384 714 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 SERPINA6P08185 405 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 PCNAP12004 261 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 GRK2P25098 689 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 FOXA1P55317 472 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 TCHHL1Q5QJ38 904 aaPredicted RBP17.92■□□□□ 0.46
CCDC9-205ENST00000600117 MANEAQ5SRI9 462 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 YOD1Q5VVQ6 348 aaPredicted RBP17.92■□□□□ 0.46
CCDC9-205ENST00000600117 FRG2Q64ET8 278 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 TMEM214Q6NUQ4 689 aaKnown RBP17.92■□□□□ 0.46
CCDC9-205ENST00000600117 CUZD1Q86UP6 607 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 RNF175Q8N4F7 328 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 TTC29Q8NA56 475 aaPredicted RBP17.92■□□□□ 0.46
CCDC9-205ENST00000600117 KCT2Q8NC54 265 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 HUS1BQ8NHY5 278 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 REPS1Q96D71 796 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 FRG2BQ96QU4 278 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 ZNF395Q9H8N7 513 aaPredicted RBP17.92■□□□□ 0.46
CCDC9-205ENST00000600117 ACTR5Q9H9F9 607 aaPredicted RBP17.92■□□□□ 0.46
CCDC9-205ENST00000600117 CUTCQ9NTM9 273 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 ACSL6Q9UKU0 697 aa17.92■□□□□ 0.46
CCDC9-205ENST00000600117 SPTBN1Q01082 2364 aaKnown RBP17.91■□□□□ 0.46
CCDC9-205ENST00000600117 FER1L5A0AVI2 2057 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 SUV39H1O43463 412 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 CPNE3O75131 537 aaKnown RBP17.91■□□□□ 0.46
CCDC9-205ENST00000600117 LYPLA1O75608 230 aaPredicted RBP17.91■□□□□ 0.46
CCDC9-205ENST00000600117 SERPIND1P05546 499 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 SLC35G6P0C7Q6 338 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 SERPINB1P30740 379 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 RORAP35398 523 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 PIK3CBP42338 1070 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 HTR6P50406 440 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 NEK2P51955 445 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 ABCE1P61221 599 aaKnown RBP17.91■□□□□ 0.46
CCDC9-205ENST00000600117 BST1Q10588 318 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 GPS2Q13227 327 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms