RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 FAM53BQ14153 422 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 DEFB134Q4QY38 66 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 ADNP2Q6IQ32 1131 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 MED27Q6P2C8 311 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 ABHD13Q7L211 337 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 SHISA5Q8N114 240 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 ZNF843Q8N446 348 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 ARHGEF39Q8N4T4 335 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 AMER3Q8N944 861 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 TTLQ8NG68 377 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 OR5T3Q8NGG3 340 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 OR2Y1Q8NGV0 311 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 OR51Q1Q8NH59 317 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 STT3BQ8TCJ2 826 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 UTP15Q8TED0 518 aaKnown RBP10.51□□□□□ -0.73
LIG1-211ENST00000596457 PPP4R1Q8TF05 950 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 APOBEC4Q8WW27 367 aaKnown RBP10.51□□□□□ -0.73
LIG1-211ENST00000596457 MTFMTQ96DP5 389 aaKnown RBP10.51□□□□□ -0.73
LIG1-211ENST00000596457 MVB12AQ96EY5 273 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 FAR2Q96K12 515 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 NSUN5Q96P11 429 aaKnown RBP10.51□□□□□ -0.73
LIG1-211ENST00000596457 CDK15Q96Q40 435 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 ROPN1BQ9BZX4 212 aaPredicted RBP10.51□□□□□ -0.73
LIG1-211ENST00000596457 RHBGQ9H310 441 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 C12orf65Q9H3J6 166 aaKnown RBP10.51□□□□□ -0.73
LIG1-211ENST00000596457 CENPHQ9H3R5 247 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 NT5DC2Q9H857 520 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 ROPN1Q9HAT0 212 aaPredicted RBP10.51□□□□□ -0.73
LIG1-211ENST00000596457 SEMA4BQ9NPR2 832 aaPredicted RBP10.51□□□□□ -0.73
LIG1-211ENST00000596457 ENAMQ9NRM1 1142 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 AHCTF1Q8WYP5 2266 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 ANKRD17O75179 2603 aaKnown RBP10.51□□□□□ -0.73
LIG1-211ENST00000596457 A6NL46 340 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 H0YIG0 161 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 STX16-NPEPL1H3BU86 382 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 MASP2O00187 686 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 PEX12O00623 359 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 E2F3O00716 465 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 STX16O14662 325 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 DLX3O60479 287 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 DNAJB6O75190 326 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 SPAG7O75391 227 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 SUPT7LO94864 414 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 TGFB1P01137 390 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 TUBBP07437 444 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 UMODP07911 640 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 SERPINA6P08185 405 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 FAM87AP0C7U9 286 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 CCL11P51671 97 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 PLA2G16P53816 162 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 EMP2P54851 167 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 CDH13P55290 713 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 STXBP1P61764 594 aaKnown RBP10.5□□□□□ -0.73
LIG1-211ENST00000596457 BTN3A2P78410 334 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 HYAL2Q12891 473 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 HERC3Q15034 1050 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 CPSF6Q16630 551 aaKnown RBP eCLIP10.5□□□□□ -0.73
LIG1-211ENST00000596457 KRT71Q3SY84 523 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 CRTC2Q53ET0 693 aaPredicted RBP10.5□□□□□ -0.73
LIG1-211ENST00000596457 CPZQ66K79 652 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 TTC19Q6DKK2 380 aaPredicted RBP10.5□□□□□ -0.73
LIG1-211ENST00000596457 GRHL2Q6ISB3 625 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 LAPTM4BQ86VI4 370 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 PDSS2Q86YH6 399 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 SRRM1Q8IYB3 904 aaKnown RBP10.5□□□□□ -0.73
LIG1-211ENST00000596457 CNPY4Q8N129 248 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 RNF175Q8N4F7 328 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 TMEM151AQ8N4L1 468 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 MREGQ8N565 214 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 CREB3L4Q8TEY5 395 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 THAP4Q8WY91 577 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 UBE2E3Q969T4 207 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 WDR34Q96EX3 536 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 PEX11GQ96HA9 241 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 F2RL3Q96RI0 385 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 SPSB2Q99619 263 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 CRB3Q9BUF7 120 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 RBCK1Q9BYM8 510 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 SLC6A16Q9GZN6 736 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 EHD1Q9H4M9 534 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 CLMPQ9H6B4 373 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 WDR54Q9H977 334 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 MKKSQ9NPJ1 570 aaPredicted RBP10.5□□□□□ -0.73
LIG1-211ENST00000596457 RRAGDQ9NQL2 400 aaPredicted RBP10.5□□□□□ -0.73
LIG1-211ENST00000596457 C3orf18Q9UK00 162 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 NXT1Q9UKK6 140 aaKnown RBP10.5□□□□□ -0.73
LIG1-211ENST00000596457 PCTPQ9UKL6 214 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 GRID1Q9ULK0 1009 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 RNF11Q9Y3C5 154 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 MAP4K5Q9Y4K4 846 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 KCNMB2Q9Y691 235 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 SLC22A7Q9Y694 548 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 PTPN13Q12923 2485 aa10.5□□□□□ -0.73
LIG1-211ENST00000596457 MYO9AB2RTY4 2548 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 PCSK5Q92824 1860 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 OR2W5A6NFC9 320 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 VSTM2BA6NLU5 285 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 B8ZZF3 427 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 C4orf51C9J302 202 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 SAP18O00422 153 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms