RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 ICAM2P13598 275 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 MTHFD2P13995 350 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 EPORP19235 508 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 TFEBP19484 476 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 SOX11P35716 441 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 HSPA7P48741 367 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 SKP1P63208 163 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 TBCCQ15814 346 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 MROH9Q5TGP6 573 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 TMIGD1Q6UXZ0 262 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 RIPOR1Q6ZS17 1223 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 RAPH1Q70E73 1250 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 ABHD13Q7L211 337 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 ZADH2Q8N4Q0 377 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 CEP112Q8N8E3 955 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 PPP4R1Q8TF05 950 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 UBTD2Q8WUN7 234 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 SLC44A1Q8WWI5 657 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 IFT81Q8WYA0 676 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 ISL2Q96A47 359 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 NXNL1Q96CM4 212 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 TUBB6Q9BUF5 446 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 CD244Q9BZW8 370 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 AICDAQ9GZX7 198 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 ALG9Q9H6U8 611 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 RIC8BQ9NVN3 520 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 WWOXQ9NZC7 414 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 NUDT4Q9NZJ9 180 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 CD274Q9NZQ7 290 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 HCN3Q9P1Z3 774 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 RNF112Q9ULX5 631 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 PLAAQ9Y263 795 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 LRRK2Q5S007 2527 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 CLEC18AA5D8T8 446 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 CHST10O43529 356 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 DNAJB6O75190 326 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 WFS1O76024 890 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 TBX6O95947 436 aaPredicted RBP12.31□□□□□ -0.44
USE1-207ENST00000596136 ALDOAP04075 364 aaKnown RBP12.31□□□□□ -0.44
USE1-207ENST00000596136 ZNF888P0CJ79 500 aaPredicted RBP12.31□□□□□ -0.44
USE1-207ENST00000596136 MAGEA12P43365 314 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 AGTR2P50052 363 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 AP2B1P63010 937 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 RHAGQ02094 409 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 SLBPQ14493 270 aaKnown RBP eCLIP12.31□□□□□ -0.44
USE1-207ENST00000596136 RBBP5Q15291 538 aaKnown RBP12.31□□□□□ -0.44
USE1-207ENST00000596136 INPP5JQ15735 1006 aaPredicted RBP12.31□□□□□ -0.44
USE1-207ENST00000596136 ADPRMQ3LIE5 342 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 DEFB134Q4QY38 66 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 IRAK1BP1Q5VVH5 260 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 FAAH2Q6GMR7 532 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 CLEC18BQ6UXF7 455 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 ISLR2Q6UXK2 745 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 LRRC70Q7Z2Q7 622 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 CPEB2Q7Z5Q1 589 aaKnown RBP12.31□□□□□ -0.44
USE1-207ENST00000596136 KRT78Q8N1N4 520 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 CLEC18CQ8NCF0 446 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 OR5T3Q8NGG3 340 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 CPT1CQ8TCG5 803 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 METTL21AQ8WXB1 218 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 ESAMQ96AP7 390 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 GPR78Q96P69 363 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 BARD1Q99728 777 aaKnown RBP12.31□□□□□ -0.44
USE1-207ENST00000596136 WDR77Q9BQA1 342 aaPredicted RBP12.31□□□□□ -0.44
USE1-207ENST00000596136 MFRPQ9BY79 579 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 RHBGQ9H310 441 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 KLHL31Q9H511 634 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 SLAMF7Q9NQ25 335 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 SNX15Q9NRS6 342 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 ZNF490Q9ULM2 529 aaPredicted RBP12.31□□□□□ -0.44
USE1-207ENST00000596136 ASB1Q9Y576 335 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 COL12A1Q99715 3063 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 ESPL1Q14674 2120 aa12.31□□□□□ -0.44
USE1-207ENST00000596136 SETXQ7Z333 2677 aaKnown RBP12.3□□□□□ -0.44
USE1-207ENST00000596136 LRIT2A6NDA9 550 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 OR2W5A6NFC9 320 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 SYCE1LA8MT33 242 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 MAGEB17A8MXT2 336 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 C4orf51C9J302 202 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 CLGNO14967 610 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 KLK8O60259 260 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 CLEC3AO75596 197 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 KLHL2O95198 593 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 ACSL3O95573 720 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 B3GALT4O96024 378 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 S100BP04271 92 aaPredicted RBP12.3□□□□□ -0.44
USE1-207ENST00000596136 SERPIND1P05546 499 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 FHP07954 510 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 CD22P20273 847 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 SERPINB8P50452 374 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 STXBP1P61764 594 aaKnown RBP12.3□□□□□ -0.44
USE1-207ENST00000596136 EEF1A2Q05639 463 aaKnown RBP12.3□□□□□ -0.44
USE1-207ENST00000596136 MFAP5Q13361 173 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 LAPTM5Q13571 262 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 BMPR2Q13873 1038 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 DOC2AQ14183 400 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 ACAP2Q15057 778 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 PDK4Q16654 411 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 FAM83EQ2M2I3 478 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 MINDY4Q4G0A6 757 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms