RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 TBX6O95947 436 aaPredicted RBP18.35■□□□□ 0.53
PNKP-207ENST00000596014 ONECUT2O95948 504 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 CAPN1P07384 714 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 PCNAP12004 261 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 LIFP15018 202 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 F8A1P23610 371 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 ITPKBP27987 946 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 OR1D4P47884 311 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 SEC24CP53992 1094 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 NAA20P61599 178 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 TLE3Q04726 772 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 CFAP157Q5JU67 520 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 ZCCHC10Q8TBK6 192 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 ZNF473Q8WTR7 871 aaKnown RBP18.35■□□□□ 0.53
PNKP-207ENST00000596014 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.35■□□□□ 0.53
PNKP-207ENST00000596014 CCT6BQ92526 530 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 KIAA1143Q96AT1 154 aaPredicted RBP18.35■□□□□ 0.53
PNKP-207ENST00000596014 CCNL2Q96S94 520 aaPredicted RBP18.35■□□□□ 0.53
PNKP-207ENST00000596014 MECRQ9BV79 373 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 KLHL31Q9H511 634 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 GPN2Q9H9Y4 310 aaPredicted RBP18.35■□□□□ 0.53
PNKP-207ENST00000596014 SLC22A11Q9NSA0 550 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 INTS9Q9NV88 658 aaKnown RBP18.35■□□□□ 0.53
PNKP-207ENST00000596014 CDC14AQ9UNH5 594 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 TSC22D4Q9Y3Q8 395 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 MAU2Q9Y6X3 613 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 PTPRQQ9UMZ3 2332 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 A0A0A6YYC8 382 aaPredicted RBP18.34■□□□□ 0.53
PNKP-207ENST00000596014 LRIT2A6NDA9 550 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 I3L1I5 382 aaPredicted RBP18.34■□□□□ 0.53
PNKP-207ENST00000596014 FAM107AO95990 144 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 ATXN8OSP0DMR3 200 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 LCP2Q13094 533 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 DNASE1L3Q13609 305 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 SLC9A5Q14940 896 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 ZRSR2Q15696 482 aaKnown RBP18.34■□□□□ 0.53
PNKP-207ENST00000596014 GGTA1PQ4G0N0 100 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 LETMD1Q6P1Q0 360 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 FAM198BQ6UWH4 519 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 AFAP1L2Q8N4X5 818 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 HUS1BQ8NHY5 278 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 UTP15Q8TED0 518 aaKnown RBP18.34■□□□□ 0.53
PNKP-207ENST00000596014 REPS1Q96D71 796 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 MAGEB10Q96LZ2 347 aaPredicted RBP18.34■□□□□ 0.53
PNKP-207ENST00000596014 ZNF382Q96SR6 550 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 GATA5Q9BWX5 397 aaPredicted RBP18.34■□□□□ 0.53
PNKP-207ENST00000596014 AICDAQ9GZX7 198 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 ZNF304Q9HCX3 659 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 IFT80Q9P2H3 777 aaPredicted RBP18.34■□□□□ 0.53
PNKP-207ENST00000596014 TMEM120BA0PK00 339 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 C21orf140B9A014 251 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 ZWINTO95229 277 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 BPGMP07738 259 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 PIM1P11309 404 aaPredicted RBP18.34■□□□□ 0.53
PNKP-207ENST00000596014 IL1RNP18510 177 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 SERPINB1P30740 379 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 ASPHQ12797 758 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 TOR1AIP1Q5JTV8 583 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 MLIPQ5VWP3 458 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 FRMD7Q6ZUT3 714 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 GPRIN3Q6ZVF9 776 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 PRSS41Q7RTY9 318 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 SYVN1Q86TM6 617 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 OR9A4Q8NGU2 314 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 COL26A1Q96A83 441 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 MMABQ96EY8 250 aaPredicted RBP18.34■□□□□ 0.53
PNKP-207ENST00000596014 C17orf62Q9BQA9 187 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 GPR87Q9BY21 358 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 CCDC134Q9H6E4 229 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 ANKHQ9HCJ1 492 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 IL17BQ9UHF5 180 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 ADGRE2Q9UHX3 823 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 STK38LQ9Y2H1 464 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 PKD1L2Q7Z442 2459 aa18.34■□□□□ 0.53
PNKP-207ENST00000596014 GMNCA6NCL1 334 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 URADA6NGE7 173 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 C9J4A7 227 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 UBFD1O14562 309 aaKnown RBP18.33■□□□□ 0.52
PNKP-207ENST00000596014 EFSO43281 561 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 OR4F21O95013 312 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 NSA2O95478 260 aaKnown RBP18.33■□□□□ 0.52
PNKP-207ENST00000596014 RAB40ALP0C0E4 278 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 ZNF888P0CJ79 500 aaPredicted RBP18.33■□□□□ 0.52
PNKP-207ENST00000596014 SMIM10L1P0DMW3 83 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 ALOX12P18054 663 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 HNRNPH1P31943 449 aaKnown RBP18.33■□□□□ 0.52
PNKP-207ENST00000596014 PIK3CBP42338 1070 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 AVPR1BP47901 424 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 SERPINB4P48594 390 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 STXBP1P61764 594 aaKnown RBP18.33■□□□□ 0.52
PNKP-207ENST00000596014 RPS15P62841 145 aaKnown RBP18.33■□□□□ 0.52
PNKP-207ENST00000596014 DDX39BQ13838 428 aaKnown RBP18.33■□□□□ 0.52
PNKP-207ENST00000596014 HERC3Q15034 1050 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 ADPRMQ3LIE5 342 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 ABHD13Q7L211 337 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 PDSS2Q86YH6 399 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 WDR20Q8TBZ3 569 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 MS4A6EQ96DS6 147 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 SMIM10Q96HG1 83 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 MTERF1Q99551 399 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms