RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 ITGAMP11215 1152 aa16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 EFNA3P52797 238 aa16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 CDKL1Q00532 357 aa16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 NAE1Q13564 534 aa16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 ZKSCAN8Q15776 578 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 UAP1Q16222 522 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 NDUFA9Q16795 377 aa16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 TRMT10CQ7L0Y3 403 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 TAOK1Q7L7X3 1001 aa16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 EIF1ADQ8N9N8 165 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 ANKRD49Q8WVL7 239 aa16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 MRRFQ96E11 262 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 ATG10Q9H0Y0 220 aa16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 TMEM184CQ9NVA4 438 aa16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 SUCOQ9UBS9 1254 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 MKL2Q9ULH7 1088 aa16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 OARD1Q9Y530 152 aa16.58■□□□□ 0.24
SHKBP1-203ENST00000594298 MDC1Q14676 2089 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 NPEPPSL1A6NEC2 478 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 H0YIG0 161 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 CDC7O00311 574 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 P2RX6O15547 441 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 PHGDHO43175 533 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 PRAMEF2O60811 474 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 FAM155BO75949 473 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 UNC5CO95185 931 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 GUCA1CO95843 209 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 UQCRHP07919 91 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 INHBAP08476 426 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 C8orf89P0DMQ9 161 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 MST1P26927 711 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 HNMTP50135 292 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 TBPL1P62380 186 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 SYT16Q17RD7 645 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 TEX35Q5T0J7 233 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 ABHD17BQ5VST6 288 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 MTFR2Q6P444 385 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 LCTLQ6UWM7 567 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 SBSNQ6UWP8 590 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 ADCK2Q7Z695 626 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 TBC1D1Q86TI0 1168 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 C17orf64Q86WR6 236 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 MCEMP1Q8IX19 187 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 SUN3Q8TAQ9 357 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 ALKBH8Q96BT7 664 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 EGFL8Q99944 293 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 SGPP1Q9BX95 441 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 STMN3Q9NZ72 180 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 SEC14L3Q9UDX4 400 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 TEKT2Q9UIF3 430 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 ABCA12Q86UK0 2595 aa16.57■□□□□ 0.24
SHKBP1-203ENST00000594298 TRGV8A0A0C4DH27 118 aa16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 HAT1O14929 419 aa16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 WISP3O95389 354 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 F10P00742 488 aa16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 CA7P43166 264 aa16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 MSH2P43246 934 aa16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 AVPR1BP47901 424 aa16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 SERPINB9P50453 376 aa16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 EFTUD2Q15029 972 aaKnown RBP eCLIP16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 PPP1R3AQ16821 1122 aa16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 RPTNQ6XPR3 784 aa16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 BNC2Q6ZN30 1099 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 MBOAT1Q6ZNC8 495 aa16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 ZNF808Q8N4W9 903 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 OR56A3Q8NH54 315 aa16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 METTL21AQ8WXB1 218 aa16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 CCDC120Q96HB5 630 aa16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 VN1R1Q9GZP7 353 aa16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 NMRAL1Q9HBL8 299 aa16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 ACOT9Q9Y305 439 aa16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 LRBAP50851 2863 aa16.56■□□□□ 0.24
SHKBP1-203ENST00000594298 KCNE1BA0A087WTH5 132 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 A0A087X1B8 175 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 ESPNB1AK53 854 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 H7BY64 318 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 KRT38O76015 456 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 NSA2O95478 260 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 ABHD2P08910 425 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 CD1DP15813 335 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 CNTFP26441 200 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 GRNP28799 593 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 PTGER4P35408 488 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 GRK3P35626 688 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 SNRPNP63162 240 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 MAT1AQ00266 395 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 ZNF33BQ06732 778 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 CSHL1Q14406 222 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 TSNQ15631 228 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 CDKL4Q5MAI5 379 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 LGSNQ5TDP6 509 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 MROH9Q5TGP6 573 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 PLAG1Q6DJT9 500 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 H3F3CQ6NXT2 135 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 GPSM1Q86YR5 675 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 CNPY4Q8N129 248 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 TCAIMQ8N3R3 496 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 SLC44A1Q8WWI5 657 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 UBXN10Q96LJ8 280 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms