RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 HMX1Q9NP08 348 aaPredicted RBP15.87■□□□□ 0.13
LIG1-206ENST00000594067 HS3ST2Q9Y278 367 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 A3GALT2U3KPV4 340 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 GNG14A0A1W2PPG7 69 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 PITPNM1O00562 1244 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 UGDHO60701 494 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 ALDH1A1P00352 501 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 URODP06132 367 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 IDSP22304 550 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 CA8P35219 290 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 CASP3P42574 277 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 CRATP43155 626 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 OR1E2P47887 323 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 NUDT6P53370 316 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 ZDHHC20Q5W0Z9 365 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 ZNF852Q6ZMS4 543 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 OR4A15Q8NGL6 344 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 CAPSLQ8WWF8 208 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 LMLNQ96KR4 655 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 GABARAPL3Q9BY60 117 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 FAM83DQ9H4H8 585 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 RLIMQ9NVW2 624 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 STOX2Q9P2F5 926 aaPredicted RBP15.87■□□□□ 0.13
LIG1-206ENST00000594067 BTNL2Q9UIR0 455 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 LYVE1Q9Y5Y7 322 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 MGAT4DA6NG13 374 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 KPNA5O15131 536 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 GSTM1P09488 218 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 ETV3P41162 512 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 CSNK2BP67870 215 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 ZNF45Q02386 682 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 FOXD4Q12950 439 aaPredicted RBP15.86■□□□□ 0.13
LIG1-206ENST00000594067 TIGD6Q17RP2 521 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 COX20Q5RI15 118 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 GRHL2Q6ISB3 625 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 USP43Q70EL4 1123 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 SLC5A8Q8N695 610 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 VPS37AQ8NEZ2 397 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 YME1L1Q96TA2 773 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 CPEB1Q9BZB8 566 aaKnown RBP15.86■□□□□ 0.13
LIG1-206ENST00000594067 MOV10Q9HCE1 1003 aaKnown RBP15.86■□□□□ 0.13
LIG1-206ENST00000594067 NDUFAF4Q9P032 175 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 NOX1Q9Y5S8 564 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 A0A1W2PRU2 124 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 H0YIV9 168 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 LEFTY2O00292 366 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 ETFAP13804 333 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 PCGF2P35227 344 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 PRKCDQ05655 676 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 TBCEQ15813 527 aaPredicted RBP15.86■□□□□ 0.13
LIG1-206ENST00000594067 CYP27C1Q4G0S4 372 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 ZNF385BQ569K4 471 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 CCBE1Q6UXH8 406 aaPredicted RBP15.86■□□□□ 0.13
LIG1-206ENST00000594067 SLC46A3Q7Z3Q1 461 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 MMAAQ8IVH4 418 aaKnown RBP15.86■□□□□ 0.13
LIG1-206ENST00000594067 CCDC103Q8IW40 242 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 AMER2Q8N7J2 671 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 OR4K1Q8NGD4 311 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 ATL1Q8WXF7 558 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 SAMD11Q96NU1 681 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 TP63Q9H3D4 680 aaPredicted RBP15.86■□□□□ 0.13
LIG1-206ENST00000594067 RNF167Q9H6Y7 350 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 ITM2CQ9NQX7 267 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 RAD18Q9NS91 495 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 PSORS1C1Q9UIG5 152 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 SLC25A13Q9UJS0 675 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 PADI2Q9Y2J8 665 aa15.86■□□□□ 0.13
LIG1-206ENST00000594067 CAB39Q9Y376 341 aaPredicted RBP15.86■□□□□ 0.13
LIG1-206ENST00000594067 HAT1O14929 419 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 TSPAN6O43657 245 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 GBAP04062 536 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 GGT2P36268 569 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 IDH2P48735 452 aaKnown RBP15.85■□□□□ 0.13
LIG1-206ENST00000594067 C21orf58P58505 322 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 RPS13P62277 151 aaKnown RBP15.85■□□□□ 0.13
LIG1-206ENST00000594067 SELENOWP63302 87 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 ELP6Q0PNE2 266 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 PPIGQ13427 754 aaKnown RBP eCLIP15.85■□□□□ 0.133e-7■■■□□ 17.1
LIG1-206ENST00000594067 KCNC3Q14003 757 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 SYTL3Q4VX76 610 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 SOWAHCQ53LP3 525 aaPredicted RBP15.85■□□□□ 0.13
LIG1-206ENST00000594067 GDPD4Q6W3E5 623 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 GDPD3Q7L5L3 318 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 SYTL1Q8IYJ3 562 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 SLC39A11Q8N1S5 342 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 C11orf65Q8NCR3 313 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 OR7G3Q8NG95 312 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 OR10G2Q8NGC3 310 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 HUS1BQ8NHY5 278 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 CHAC2Q8WUX2 184 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 GGHQ92820 318 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 TEX28O15482 410 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 SLCO2B1O94956 709 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 HLA-EP13747 358 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 HNF4AP41235 474 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 ASMTP46597 345 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 CTSCP53634 463 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 SLC7A9P82251 487 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 ANXA8L1Q5VT79 327 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 RASGRP3Q8IV61 690 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms