RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 ACAD11Q709F0 780 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 NUDCD3Q8IVD9 361 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 OR4N4Q8N0Y3 316 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 ABHD11Q8NFV4 315 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 SLC5A11Q8WWX8 675 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 DTNBP1Q96EV8 351 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 TMEM79Q9BSE2 394 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 LHX9Q9NQ69 397 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 ZNF358Q9NW07 568 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 SRPK3Q9UPE1 567 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 H0YGG7 62 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 UCNP55089 124 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 ARF3P61204 181 aaPredicted RBP18.72■□□□□ 0.59
LSM4-203ENST00000593829 CDC16Q13042 620 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 GRM7Q14831 915 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 CHI3L2Q15782 390 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 VASH2Q86V25 355 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 ACMSDQ8TDX5 336 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 NEIL2Q969S2 332 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 OR2A5Q96R48 311 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 NDC1Q9BTX1 674 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 THTPAQ9BU02 230 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 VCX3BQ9H321 246 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 PCMTD2Q9NV79 361 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 THAP1Q9NVV9 213 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 USP24Q9UPU5 2620 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 MEN1O00255 615 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 CCNT2O60583 730 aaKnown RBP18.71■□□□□ 0.59
LSM4-203ENST00000593829 STK16O75716 305 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 EIF2S1P05198 315 aaKnown RBP18.71■□□□□ 0.59
LSM4-203ENST00000593829 MTHFD2P13995 350 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 RORAP35398 523 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 GRK3P35626 688 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 CPA2P48052 419 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 HSPA7P48741 367 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 AQP5P55064 265 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 RPS15AP62244 130 aaKnown RBP18.71■□□□□ 0.59
LSM4-203ENST00000593829 CUL3Q13618 768 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 FBXO48Q5FWF7 155 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 TECRLQ5HYJ1 363 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 CES4AQ5XG92 561 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 RHBDD2Q6NTF9 364 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 PLD3Q8IV08 490 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 DSELQ8IZU8 1212 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 TTC29Q8NA56 475 aaPredicted RBP18.71■□□□□ 0.59
LSM4-203ENST00000593829 FBXO27Q8NI29 283 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 JADE3Q92613 823 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 RERGQ96A58 199 aaPredicted RBP18.71■□□□□ 0.59
LSM4-203ENST00000593829 KIAA1143Q96AT1 154 aaPredicted RBP18.71■□□□□ 0.59
LSM4-203ENST00000593829 SCYL1Q96KG9 808 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 S100A14Q9HCY8 104 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 STARD5Q9NSY2 213 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 ZZEF1O43149 2961 aa18.71■□□□□ 0.59
LSM4-203ENST00000593829 A0A088AWK7 358 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 FITM1A5D6W6 292 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 PDLIM1O00151 329 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 ARSFP54793 590 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 BTKQ06187 659 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 C1orf146Q5VVC0 180 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 YOD1Q5VVQ6 348 aaPredicted RBP18.7■□□□□ 0.58
LSM4-203ENST00000593829 OR4K1Q8NGD4 311 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 MR1Q95460 341 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 ESAMQ96AP7 390 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 THAP11Q96EK4 314 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 CENPKQ9BS16 269 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 CD244Q9BZW8 370 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 GPN2Q9H9Y4 310 aaPredicted RBP18.7■□□□□ 0.58
LSM4-203ENST00000593829 VCX3AQ9NNX9 186 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 DNAJC11Q9NVH1 559 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 LOC101059948A0A1B0GTJ6 334 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 GFAPP14136 432 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 POLE2P56282 527 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 STX3Q13277 289 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 FAM214AQ32MH5 1076 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 CATSPEREQ5SY80 951 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 LCA5Q86VQ0 697 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 PDSS2Q86YH6 399 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 DPH2Q9BQC3 489 aaPredicted RBP18.7■□□□□ 0.58
LSM4-203ENST00000593829 EFHD1Q9BUP0 239 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 AKIRIN1Q9H9L7 192 aaPredicted RBP18.7■□□□□ 0.58
LSM4-203ENST00000593829 PELI2Q9HAT8 420 aa18.7■□□□□ 0.58
LSM4-203ENST00000593829 HEATR5BQ9P2D3 2071 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 KCNE1BA0A087WTH5 132 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 LIFP15018 202 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 GCGRP47871 477 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 CLCN2P51788 898 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 TMPRSS3P57727 454 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 SRSF6Q13247 344 aaKnown RBP18.69■□□□□ 0.58
LSM4-203ENST00000593829 LIN52Q52LA3 116 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 NXPE4Q6UWF7 544 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 ZNF517Q6ZMY9 492 aaPredicted RBP18.69■□□□□ 0.58
LSM4-203ENST00000593829 CCDC81Q6ZN84 652 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 TBC1D19Q8N5T2 526 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 CSNK1A1LQ8N752 337 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 PROKR1Q8TCW9 393 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 UBTD2Q8WUN7 234 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 MRPL57Q9BQC6 102 aaKnown RBP18.69■□□□□ 0.58
LSM4-203ENST00000593829 MECRQ9BV79 373 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 SYNPO2LQ9H987 977 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 CUTCQ9NTM9 273 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms