RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ANKRD37Q7Z713 158 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 CMC1Q7Z7K0 106 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 UTP15Q8TED0 518 aaKnown RBP13.09□□□□□ -0.31
APOC1-208ENST00000592535 ESAMQ96AP7 390 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 TUBB6Q9BUF5 446 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 SLC6A16Q9GZN6 736 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 AICDAQ9GZX7 198 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 LANCL2Q9NS86 450 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 PLA2G3Q9NZ20 509 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 WWOXQ9NZC7 414 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 C19orf25Q9UFG5 118 aaPredicted RBP13.09□□□□□ -0.31
APOC1-208ENST00000592535 HECTD1Q9ULT8 2610 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 CYSRT1A8MQ03 144 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 C4orf51C9J302 202 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 CHST10O43529 356 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 UQCRHP07919 91 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 C1GALT1C1LP0DN25 315 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 GNAZP19086 355 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 TSFMP43897 325 aaKnown RBP13.08□□□□□ -0.32
APOC1-208ENST00000592535 HSPA7P48741 367 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 AGTR2P50052 363 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 RAB8AP61006 207 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 ARG2P78540 354 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 CDC16Q13042 620 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 SLBPQ14493 270 aaKnown RBP eCLIP13.08□□□□□ -0.32
APOC1-208ENST00000592535 SLMAPQ14BN4 828 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 TLR1Q15399 786 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 EIF2S3LQ2VIR3 472 aaKnown RBP13.08□□□□□ -0.32
APOC1-208ENST00000592535 TOR1AIP1Q5JTV8 583 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 FHL5Q5TD97 284 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 ABHD13Q7L211 337 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 GPSM1Q86YR5 675 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.08□□□□□ -0.32
APOC1-208ENST00000592535 TCAIMQ8N3R3 496 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 PLPP5Q8NEB5 264 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 TRPV3Q8NET8 790 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 CREB3L4Q8TEY5 395 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 TSLPQ969D9 159 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 UBXN10Q96LJ8 280 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 OR1F2PQ96R84 312 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 KLHL31Q9H511 634 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 ZDHHC18Q9NUE0 388 aa13.08□□□□□ -0.32
APOC1-208ENST00000592535 H2AFYO75367 372 aaKnown RBP13.07□□□□□ -0.32
APOC1-208ENST00000592535 AGFG2O95081 481 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 CBX6O95503 412 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 F10P00742 488 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 FHP07954 510 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 SERPINA6P08185 405 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 SLC35E2BP0CK96 405 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 SMIM10L1P0DMW3 83 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 ICAM2P13598 275 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 IL10P22301 178 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 GGT5P36269 586 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 SKP1P63208 163 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 DLG1Q12959 904 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 ABRAXAS2Q15018 415 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 WHAMMP3Q1A5X7 153 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 BTBD16Q32M84 506 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 SULT1C3Q6IMI6 304 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 NIPAL1Q6NVV3 410 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 RAPH1Q70E73 1250 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 PDPRQ8NCN5 879 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 ZNF592Q92610 1267 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 EXT2Q93063 718 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 KIAA1191Q96A73 305 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 TBC1D20Q96BZ9 403 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 SMIM10Q96HG1 83 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 BARD1Q99728 777 aaKnown RBP13.07□□□□□ -0.32
APOC1-208ENST00000592535 DNAJC11Q9NVH1 559 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 CD274Q9NZQ7 290 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 RNF112Q9ULX5 631 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 HIVEP3Q5T1R4 2406 aa13.07□□□□□ -0.32
APOC1-208ENST00000592535 DYTNA2CJ06 578 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 BLACEA4D250 179 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 URADA6NGE7 173 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 MAGEB17A8MXT2 336 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 PRAMEF4O60810 478 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 B4GALT2O60909 372 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 SEMA7AO75326 666 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 KCNC1P48547 511 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 AP2B1P63010 937 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 NAB1Q13506 487 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 NSDHLQ15738 373 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 SFT2D3Q587I9 215 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 CDKL4Q5MAI5 379 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 UBAP2Q5T6F2 1119 aaKnown RBP13.06□□□□□ -0.32
APOC1-208ENST00000592535 PRAMEF9Q5VWM5 478 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 PLAG1Q6DJT9 500 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 PAPD4Q6PIY7 484 aaKnown RBP13.06□□□□□ -0.32
APOC1-208ENST00000592535 TMIGD1Q6UXZ0 262 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 SNX31Q8N9S9 440 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 OR1N1Q8NGS0 311 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 PRR7Q8TB68 274 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 GRHL3Q8TE85 626 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 MRRFQ96E11 262 aaKnown RBP13.06□□□□□ -0.32
APOC1-208ENST00000592535 MAGEB10Q96LZ2 347 aaPredicted RBP13.06□□□□□ -0.32
APOC1-208ENST00000592535 CAPS2Q9BXY5 557 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 ALG9Q9H6U8 611 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 CNOT10Q9H9A5 744 aaKnown RBP13.06□□□□□ -0.32
APOC1-208ENST00000592535 AGPAT4Q9NRZ5 378 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms