RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ARMC3Q5W041 872 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 ZDHHC20Q5W0Z9 365 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 DUPD1Q68J44 220 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 GLT6D1Q7Z4J2 308 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 SULF2Q8IWU5 870 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 ARHGEF39Q8N4T4 335 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 SLC25A41Q8N5S1 370 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 HORMAD2Q8N7B1 307 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 EIF1ADQ8N9N8 165 aaKnown RBP5.7□□□□□ -1.5
VPS25-204ENST00000589577 POGLUT1Q8NBL1 392 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 NAXEQ8NCW5 288 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 MCUQ8NE86 351 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 SPATA22Q8NHS9 363 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 LINC01560Q8TB33 94 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 BLOC1S5Q8TDH9 187 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 RNASE6Q93091 150 aaKnown RBP5.7□□□□□ -1.5
VPS25-204ENST00000589577 LRRC39Q96DD0 335 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 TTC1Q99614 292 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 ZFYVE21Q9BQ24 234 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 PLCD4Q9BRC7 762 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 VN1R1Q9GZP7 353 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 IL22Q9GZX6 179 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 DEFB127Q9H1M4 99 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 KCNK13Q9HB14 408 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 RRAGDQ9NQL2 400 aaPredicted RBP5.7□□□□□ -1.5
VPS25-204ENST00000589577 LIPGQ9Y5X9 500 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 MAD1L1Q9Y6D9 718 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 YLPM1P49750 1951 aaKnown RBP5.69□□□□□ -1.5
VPS25-204ENST00000589577 ROS1P08922 2347 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 MAGEB16A2A368 324 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 PINLYPA6NC86 204 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 OR2W5A6NFC9 320 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 SDR42E2A6NKP2 422 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 FIGNL2A6NMB9 653 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 AGAP14A8MT82 685 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 F8W8V4 182 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 GOLGA8MH3BSY2 632 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 STX7O15400 261 aaKnown RBP5.69□□□□□ -1.5
VPS25-204ENST00000589577 DNAJB6O75190 326 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 GOSR1O95249 250 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 METTL18O95568 372 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 TTC4O95801 387 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 STATHP02808 62 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 FAM157CP0CG43 387 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 PKLRP30613 574 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 CD68P34810 354 aaPredicted RBP5.69□□□□□ -1.5
VPS25-204ENST00000589577 MAGEA6P43360 314 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 CHRNA4P43681 627 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 RPL21P46778 160 aaKnown RBP5.69□□□□□ -1.5
VPS25-204ENST00000589577 ASCL1P50553 236 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 GPR85P60893 370 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 PRAMEP78395 509 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 MAT1AQ00266 395 aaKnown RBP5.69□□□□□ -1.5
VPS25-204ENST00000589577 TNK1Q13470 666 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 KCNJ11Q14654 390 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 SLC1A5Q15758 541 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 PRTGQ2VWP7 1150 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 BBS9Q3SYG4 887 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 ZC3H12BQ5HYM0 836 aaKnown RBP5.69□□□□□ -1.5
VPS25-204ENST00000589577 RIPPLY2Q5TAB7 128 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 RNASEH2BQ5TBB1 312 aaKnown RBP5.69□□□□□ -1.5
VPS25-204ENST00000589577 ZNF585AQ6P3V2 769 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 LRRC8BQ6P9F7 803 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 FIGLAQ6QHK4 219 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 CPEB2Q7Z5Q1 589 aaKnown RBP5.69□□□□□ -1.5
VPS25-204ENST00000589577 PALM2Q8IXS6 379 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 CNPY4Q8N129 248 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 C2orf73Q8N5S3 287 aaPredicted RBP5.69□□□□□ -1.5
VPS25-204ENST00000589577 OTUD6BQ8N6M0 293 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 OR5K2Q8NHB8 316 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 ZNF398Q8TD17 642 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 PYROXD1Q8WU10 500 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 IGFBPL1Q8WX77 278 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 ROBO4Q8WZ75 1007 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 CDKL2Q92772 493 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 PIGTQ969N2 578 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 KIAA1191Q96A73 305 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 OXNAD1Q96HP4 312 aaPredicted RBP5.69□□□□□ -1.5
VPS25-204ENST00000589577 MRGPRX2Q96LB1 330 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 APOL2Q9BQE5 337 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 CCDC77Q9BR77 488 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 CNPPD1Q9BV87 410 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 PHACTR1Q9C0D0 580 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 ZDHHC11Q9H8X9 412 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 MMP25Q9NPA2 562 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 MKKSQ9NPJ1 570 aaPredicted RBP5.69□□□□□ -1.5
VPS25-204ENST00000589577 DEPPQ9NTK1 212 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.69□□□□□ -1.5
VPS25-204ENST00000589577 TXNDC16Q9P2K2 825 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 B4GALT7Q9UBV7 327 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 ZC3H7BQ9UGR2 993 aaKnown RBP5.69□□□□□ -1.5
VPS25-204ENST00000589577 ASF1AQ9Y294 204 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 TDRKHQ9Y2W6 561 aaKnown RBP5.69□□□□□ -1.5
VPS25-204ENST00000589577 DOCK7Q96N67 2140 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 SCN3AQ9NY46 2000 aa5.69□□□□□ -1.5
VPS25-204ENST00000589577 A0A0J9YVX5 310 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 LOC285095A0A1B0GVY8 99 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 ESYT3A0FGR9 886 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 ARHGEF33A8MVX0 844 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 KDM4EB2RXH2 506 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms