RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 C19orf47Q8N9M1 422 aaKnown RBP21.25■□□□□ 0.99
ATG4D-209ENST00000588857 GLB1L3Q8NCI6 653 aaPredicted RBP21.25■□□□□ 0.99
ATG4D-209ENST00000588857 TSPEARQ8WU66 669 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 RCN3Q96D15 328 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 SLC45A3Q96JT2 553 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 QRFPRQ96P65 431 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 FCRL4Q96PJ5 515 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 OR2A5Q96R48 311 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 CD180Q99467 661 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 MAP3K3Q99759 626 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 BTBD10Q9BSF8 475 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 EFCAB1Q9HAE3 211 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 SLC9B1P1A6NJY1 282 aa21.24■□□□□ 0.99
ATG4D-209ENST00000588857 PLPP1O14494 284 aa21.24■□□□□ 0.99
ATG4D-209ENST00000588857 GYG2O15488 501 aa21.24■□□□□ 0.99
ATG4D-209ENST00000588857 STATHP02808 62 aa21.24■□□□□ 0.99
ATG4D-209ENST00000588857 SLC35G6P0C7Q6 338 aa21.24■□□□□ 0.99
ATG4D-209ENST00000588857 SDHBP21912 280 aa21.24■□□□□ 0.99
ATG4D-209ENST00000588857 HNRNPH1P31943 449 aaKnown RBP21.24■□□□□ 0.99
ATG4D-209ENST00000588857 ASMTP46597 345 aa21.24■□□□□ 0.99
ATG4D-209ENST00000588857 CLNS1AP54105 237 aaKnown RBP21.24■□□□□ 0.99
ATG4D-209ENST00000588857 STXBP1P61764 594 aaKnown RBP21.24■□□□□ 0.99
ATG4D-209ENST00000588857 RGS1Q08116 209 aa21.24■□□□□ 0.99
ATG4D-209ENST00000588857 RCAN2Q14206 197 aa21.24■□□□□ 0.99
ATG4D-209ENST00000588857 SUZ12Q15022 739 aaKnown RBP21.24■□□□□ 0.99
ATG4D-209ENST00000588857 TOR1AIP1Q5JTV8 583 aa21.24■□□□□ 0.99
ATG4D-209ENST00000588857 PLXDC1Q8IUK5 500 aa21.24■□□□□ 0.99
ATG4D-209ENST00000588857 WDR48Q8TAF3 677 aa21.24■□□□□ 0.99
ATG4D-209ENST00000588857 MACROD1Q9BQ69 325 aa21.24■□□□□ 0.99
ATG4D-209ENST00000588857 DLL3Q9NYJ7 618 aa21.24■□□□□ 0.99
ATG4D-209ENST00000588857 ARHGAP10A1A4S6 786 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 DYTNA2CJ06 578 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 TLCD2A6NGC4 264 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 BBIP1A8MTZ0 92 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 ANGPT2O15123 496 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 B4GAT1O43505 415 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 GDF9O60383 454 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 PRAMEF10O60809 474 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 KLK1P06870 262 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 IL12AP29459 219 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 NUDT2P50583 147 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 GFERP55789 205 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 PWP1Q13610 501 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 VPS26BQ4G0F5 336 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 AASDHQ4L235 1098 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-209ENST00000588857 RNF44Q7L0R7 432 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 ASRGL1Q7L266 308 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 VN1R4Q7Z5H5 301 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 RBM15BQ8NDT2 890 aaKnown RBP21.23■□□□□ 0.99
ATG4D-209ENST00000588857 SRFBP1Q8NEF9 429 aaKnown RBP21.23■□□□□ 0.99
ATG4D-209ENST00000588857 CDC26Q8NHZ8 85 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 SPDL1Q96EA4 605 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 TCTN2Q96GX1 697 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 C1orf21Q9H246 121 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 TAS2R1Q9NYW7 299 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 MCM8Q9UJA3 840 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 CEP250Q9BV73 2442 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-209ENST00000588857 CCDC154A6NI56 674 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 MAP3K7O43318 606 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 KIF1CO43896 1103 aaKnown RBP21.23■□□□□ 0.99
ATG4D-209ENST00000588857 GBAP04062 536 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 ZNF883P0CG24 379 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 PRPS1L1P21108 318 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 ACTN3Q08043 901 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-209ENST00000588857 TGM3Q08188 693 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 ZNF763Q0D2J5 394 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 ART3Q13508 389 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 ADPRMQ3LIE5 342 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 ZC3H12BQ5HYM0 836 aaKnown RBP21.23■□□□□ 0.99
ATG4D-209ENST00000588857 CCNYL2Q5T2Q4 361 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 GUSBP11Q6P575 273 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 SPRED1Q7Z699 444 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 NUDT13Q86X67 352 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 KRTCAP2Q8N6L1 136 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 ZNF655Q8N720 491 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-209ENST00000588857 CAMKVQ8NCB2 501 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 FBXO27Q8NI29 283 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 NT5CQ8TCD5 201 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 NETO1Q8TDF5 533 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 NAT6Q93015 286 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 MS4A6EQ96DS6 147 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 EGLN2Q96KS0 407 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 CCDC3Q9BQI4 270 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 SYNPO2LQ9H987 977 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 RXFP3Q9NSD7 469 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 NDUFAF1Q9Y375 327 aa21.23■□□□□ 0.99
ATG4D-209ENST00000588857 DMXL1Q9Y485 3027 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 LY6G6EA0A0G2JKS1 128 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 EME2A4GXA9 379 aaPredicted RBP21.22■□□□□ 0.99
ATG4D-209ENST00000588857 H0YGG7 62 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 PRMT3O60678 531 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 RASSF9O75901 435 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 LRATO95237 230 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 KRT16P08779 473 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 CAPN3P20807 821 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 CD1CP29017 333 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 ZFP36L2P47974 494 aaKnown RBP21.22■□□□□ 0.99
ATG4D-209ENST00000588857 PLA2G16P53816 162 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 ARF3P61204 181 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms