RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 CREB3L4Q8TEY5 395 aa13.38□□□□□ -0.27
TPM4-205ENST00000586833 CMTM7Q96FZ5 175 aa13.38□□□□□ -0.27
TPM4-205ENST00000586833 OR1F2PQ96R84 312 aa13.38□□□□□ -0.27
TPM4-205ENST00000586833 ERVK-6Q9BXR3 956 aa13.38□□□□□ -0.27
TPM4-205ENST00000586833 TGIF2Q9GZN2 237 aa13.38□□□□□ -0.27
TPM4-205ENST00000586833 REXO4Q9GZR2 422 aaKnown RBP13.38□□□□□ -0.27
TPM4-205ENST00000586833 SPNS1Q9H2V7 528 aa13.38□□□□□ -0.27
TPM4-205ENST00000586833 SOX17Q9H6I2 414 aaPredicted RBP13.38□□□□□ -0.27
TPM4-205ENST00000586833 NOL11Q9H8H0 719 aaKnown RBP13.38□□□□□ -0.27
TPM4-205ENST00000586833 SLC22A11Q9NSA0 550 aa13.38□□□□□ -0.27
TPM4-205ENST00000586833 ARGLU1Q9NWB6 273 aaPredicted RBP13.38□□□□□ -0.27
TPM4-205ENST00000586833 CTSFQ9UBX1 484 aa13.38□□□□□ -0.27
TPM4-205ENST00000586833 C19orf25Q9UFG5 118 aaPredicted RBP13.38□□□□□ -0.27
TPM4-205ENST00000586833 NAALAD2Q9Y3Q0 740 aa13.38□□□□□ -0.27
TPM4-205ENST00000586833 SPACA6W5XKT8 324 aa13.38□□□□□ -0.27
TPM4-205ENST00000586833 IGLV3-12A0A075B6K2 115 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 H0YIV9 168 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 SGK494L7N484 410 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 GALR3O60755 368 aaPredicted RBP13.37□□□□□ -0.27
TPM4-205ENST00000586833 SUPT7LO94864 414 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 SIX3O95343 332 aaPredicted RBP13.37□□□□□ -0.27
TPM4-205ENST00000586833 RPS17P08708 135 aaKnown RBP13.37□□□□□ -0.27
TPM4-205ENST00000586833 ZNF888P0CJ79 500 aaPredicted RBP13.37□□□□□ -0.27
TPM4-205ENST00000586833 IMPDH1P20839 514 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 PIK3CBP42338 1070 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 PRKAA2P54646 552 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 EMP2P54851 167 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 AP2B1P63010 937 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 SLC18A2Q05940 514 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 IFT88Q13099 833 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 DEFB134Q4QY38 66 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 CFAP157Q5JU67 520 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 MILR1Q7Z6M3 343 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 ARHGEF39Q8N4T4 335 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 L3MBTL4Q8NA19 623 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 CLEC1AQ8NC01 280 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 C7orf57Q8NEG2 295 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 OR2L5Q8NG80 312 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 OR51Q1Q8NH59 317 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 UTP15Q8TED0 518 aaKnown RBP13.37□□□□□ -0.27
TPM4-205ENST00000586833 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.37□□□□□ -0.27
TPM4-205ENST00000586833 EXTL1Q92935 676 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 APOPT1Q96IL0 206 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 KCNC2Q96PR1 638 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 SPSB2Q99619 263 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 MACROD1Q9BQ69 325 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 NTMT1Q9BV86 223 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 NPLQ9BXD5 320 aaPredicted RBP13.37□□□□□ -0.27
TPM4-205ENST00000586833 C1QTNF3Q9BXJ4 246 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 MKS1Q9NXB0 559 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 TUBD1Q9UJT1 453 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 C3orf18Q9UK00 162 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 PCTPQ9UKL6 214 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 TSC22D4Q9Y3Q8 395 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 ASB1Q9Y576 335 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 KIF26BQ2KJY2 2108 aa13.37□□□□□ -0.27
TPM4-205ENST00000586833 LRIT2A6NDA9 550 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 MKRN2OSH3BPM6 223 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 ATXN7O15265 892 aaPredicted RBP13.36□□□□□ -0.27
TPM4-205ENST00000586833 ERI3O43414 337 aaKnown RBP13.36□□□□□ -0.27
TPM4-205ENST00000586833 B3GALT2O43825 422 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 RDH16O75452 317 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 MED26O95402 600 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 EPORP19235 508 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 PTX3P26022 381 aaPredicted RBP13.36□□□□□ -0.27
TPM4-205ENST00000586833 TSFMP43897 325 aaKnown RBP13.36□□□□□ -0.27
TPM4-205ENST00000586833 XCR1P46094 333 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 RAP1GDS1P52306 607 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 POLE2P56282 527 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 RAB8AP61006 207 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 KLC1Q07866 573 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 IL10RAQ13651 578 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 MINDY4Q4G0A6 757 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 GGTA1PQ4G0N0 100 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 LRIG3Q6UXM1 1119 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 ZYG11AQ6WRX3 759 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 MRGPREQ86SM8 312 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 TRABD2AQ86V40 505 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 APLFQ8IW19 511 aaPredicted RBP13.36□□□□□ -0.27
TPM4-205ENST00000586833 SRRM1Q8IYB3 904 aaKnown RBP13.36□□□□□ -0.27
TPM4-205ENST00000586833 CYP4X1Q8N118 509 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 C4orf33Q8N1A6 199 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 ARMC2Q8NEN0 867 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 MYRIPQ8NFW9 859 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 OR7G3Q8NG95 312 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 ZNF483Q8TF39 744 aaPredicted RBP13.36□□□□□ -0.27
TPM4-205ENST00000586833 TTC9Q92623 222 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 SERINC2Q96SA4 455 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 TBCDQ9BTW9 1192 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 ELOVL6Q9H5J4 265 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 SEMA4BQ9NPR2 832 aaPredicted RBP13.36□□□□□ -0.27
TPM4-205ENST00000586833 NMRK1Q9NWW6 199 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 HCN3Q9P1Z3 774 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 SNX6Q9UNH7 406 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 MRPS33Q9Y291 106 aaKnown RBP13.36□□□□□ -0.27
TPM4-205ENST00000586833 WDFY3Q8IZQ1 3526 aa13.36□□□□□ -0.27
TPM4-205ENST00000586833 MAP1BP46821 2468 aaKnown RBP13.35□□□□□ -0.27
TPM4-205ENST00000586833 ARGFXA6NJG6 315 aa13.35□□□□□ -0.27
TPM4-205ENST00000586833 AGPSO00116 658 aa13.35□□□□□ -0.27
TPM4-205ENST00000586833 DLX3O60479 287 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms