RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 RABEPKQ7Z6M1 372 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 AMIGO1Q86WK6 493 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 PROSER1Q86XN7 944 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 PTRH1Q86Y79 214 aaKnown RBP9.96□□□□□ -0.82
LIG3-203ENST00000585370 AQP12AQ8IXF9 295 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 PHACTR4Q8IZ21 702 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 TMEM132CQ8N3T6 1108 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 C1orf52Q8N6N3 182 aaKnown RBP9.96□□□□□ -0.82
LIG3-203ENST00000585370 EFCAB3Q8N7B9 438 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 MFSD2AQ8NA29 543 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 OR2A1Q8NGT9 310 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 LCN9Q8WX39 176 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 DNASE2BQ8WZ79 361 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 GTF2H4Q92759 462 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 TSACCQ96A04 125 aaPredicted RBP9.96□□□□□ -0.82
LIG3-203ENST00000585370 MTERF3Q96E29 417 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 PDXPQ96GD0 296 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 TSSK3Q96PN8 268 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 SARGQ9BW04 601 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 NANOGQ9H9S0 305 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 EBF2Q9HAK2 575 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 IL1RL2Q9HB29 575 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 MRPS30Q9NP92 439 aaKnown RBP9.96□□□□□ -0.82
LIG3-203ENST00000585370 ATAD3AQ9NVI7 634 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 FAM120CQ9NX05 1096 aaKnown RBP9.96□□□□□ -0.82
LIG3-203ENST00000585370 CMTM6Q9NX76 183 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 C6orf203Q9P0P8 240 aaPredicted RBP9.96□□□□□ -0.82
LIG3-203ENST00000585370 TBC1D29Q9UFV1 150 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 MCM8Q9UJA3 840 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 ADAM29Q9UKF5 820 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.96□□□□□ -0.82
LIG3-203ENST00000585370 MSRB2Q9Y3D2 182 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 NEUROG3Q9Y4Z2 214 aa9.96□□□□□ -0.82
LIG3-203ENST00000585370 GNG14A0A1W2PPG7 69 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 A6NCN8 305 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 PRORSD1PA6NEY8 169 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 OR52A4PA6NMU1 304 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 C9JVG2 144 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 H0Y8X5 98 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 NME4O00746 187 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 SH3BP5O60239 455 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 GMNNO75496 209 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 ANP32DO95626 131 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 BAG2O95816 211 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 C8BP07358 591 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 THEGLP0DJG4 465 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 UMPSP11172 480 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 CTSEP14091 401 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 GNSP15586 552 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 HOXB6P17509 224 aaKnown RBP9.95□□□□□ -0.82
LIG3-203ENST00000585370 AHRP35869 848 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 PTDSS1P48651 473 aaKnown RBP9.95□□□□□ -0.82
LIG3-203ENST00000585370 DGKQP52824 942 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 TRA2BP62995 288 aaKnown RBP9.95□□□□□ -0.82
LIG3-203ENST00000585370 RHDQ02161 417 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 ZNF763Q0D2J5 394 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 SLC14A1Q13336 389 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 KIR2DS3Q14952 304 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 PGS1Q32NB8 556 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 TMEM35AQ53FP2 167 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 RUNDC3AQ59EK9 446 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 SPANXN4Q5MJ08 99 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 LRIF1Q5T3J3 769 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 CPTPQ5TA50 214 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 DUS1LQ6P1R4 473 aaKnown RBP9.95□□□□□ -0.82
LIG3-203ENST00000585370 IKBIPQ70UQ0 350 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 SDR16C5Q8N3Y7 309 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 KRTCAP2Q8N6L1 136 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 LMNTD1Q8N9Z9 388 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 LINC01555Q8NAE3 123 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 SRFBP1Q8NEF9 429 aaKnown RBP9.95□□□□□ -0.82
LIG3-203ENST00000585370 BHLHE22Q8NFJ8 381 aaPredicted RBP9.95□□□□□ -0.82
LIG3-203ENST00000585370 OR13H1Q8NG92 308 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 DNAJB14Q8TBM8 379 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 COQ8BQ96D53 544 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 RSRC1Q96IZ7 334 aaKnown RBP9.95□□□□□ -0.82
LIG3-203ENST00000585370 GBP5Q96PP8 586 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 KCTD14Q9BQ13 255 aaPredicted RBP9.95□□□□□ -0.82
LIG3-203ENST00000585370 ACAT2Q9BWD1 397 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 TMEM168Q9H0V1 697 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 SRMSQ9H3Y6 488 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 POT1Q9NUX5 634 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 ACTR3BQ9P1U1 418 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 ANKMY1Q9P2S6 941 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 ATP6V1HQ9UI12 483 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 BTNL2Q9UIR0 455 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 ICKQ9UPZ9 632 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 SH2B3Q9UQQ2 575 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 CA5BQ9Y2D0 317 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 ENTPD2Q9Y5L3 495 aa9.95□□□□□ -0.82
LIG3-203ENST00000585370 PRSS51A0A1B0GVH4 220 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 TCRBV3S1A0A5B6 114 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 TMEM8BA6NDV4 472 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 H7BY64 318 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 SCAMP2O15127 329 aaKnown RBP9.94□□□□□ -0.82
LIG3-203ENST00000585370 MAP3K7O43318 606 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 PCDH7O60245 1069 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 TBX19O60806 448 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 SORBS2O94875 1100 aaKnown RBP9.94□□□□□ -0.82
LIG3-203ENST00000585370 TGFB1P01137 390 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms