RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 SERPINI1Q99574 410 aa13.88□□□□□ -0.19
SCAMP4-209ENST00000585335 MACROD1Q9BQ69 325 aa13.88□□□□□ -0.19
SCAMP4-209ENST00000585335 SHCBP1LQ9BZQ2 653 aa13.88□□□□□ -0.19
SCAMP4-209ENST00000585335 ROGDIQ9GZN7 287 aa13.88□□□□□ -0.19
SCAMP4-209ENST00000585335 REXO4Q9GZR2 422 aaKnown RBP13.88□□□□□ -0.19
SCAMP4-209ENST00000585335 SYNPO2LQ9H987 977 aa13.88□□□□□ -0.19
SCAMP4-209ENST00000585335 COPS7BQ9H9Q2 264 aaPredicted RBP13.88□□□□□ -0.19
SCAMP4-209ENST00000585335 DMRT3Q9NQL9 472 aa13.88□□□□□ -0.19
SCAMP4-209ENST00000585335 PFDN4Q9NQP4 134 aa13.88□□□□□ -0.19
SCAMP4-209ENST00000585335 PSD3Q9NYI0 1048 aa13.88□□□□□ -0.19
SCAMP4-209ENST00000585335 DHCR7Q9UBM7 475 aaKnown RBP13.88□□□□□ -0.19
SCAMP4-209ENST00000585335 GPN3Q9UHW5 284 aaPredicted RBP13.88□□□□□ -0.19
SCAMP4-209ENST00000585335 PPT2Q9UMR5 302 aa13.88□□□□□ -0.19
SCAMP4-209ENST00000585335 LRIT2A6NDA9 550 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 MANBAO00462 879 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 UBFD1O14562 309 aaKnown RBP13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 AZIN1O14977 448 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 CD63P08962 238 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 ZNF888P0CJ79 500 aaPredicted RBP13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 HSD3B1P14060 373 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 CHN1P15882 459 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 ALOX12P18054 663 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 FBLP22087 321 aaKnown RBP13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 HSD3B2P26439 372 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 RORAP35398 523 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 CCR10P46092 362 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 GCGRP47871 477 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 SLC1A6P48664 564 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 CSTF3Q12996 717 aaKnown RBP13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 KHDRBS2Q5VWX1 349 aaKnown RBP13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 VN1R5Q7Z5H4 357 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 IL22RA1Q8N6P7 574 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 GBP7Q8N8V2 638 aaPredicted RBP13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 OR2L5Q8NG80 312 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 OR6Y1Q8NGX8 325 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 SNIP1Q8TAD8 396 aaKnown RBP13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 WDR20Q8TBZ3 569 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 LRRC8CQ8TDW0 803 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 KCNE4Q8WWG9 221 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 COL26A1Q96A83 441 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 RGMAQ96B86 450 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 MTFMTQ96DP5 389 aaKnown RBP13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 MMABQ96EY8 250 aaPredicted RBP13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 GBP5Q96PP8 586 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 KCNC2Q96PR1 638 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 MS4A8Q9BY19 250 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 ILKAPQ9H0C8 392 aaPredicted RBP13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 MANSC1Q9H8J5 431 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 BRF2Q9HAW0 419 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 ZNF304Q9HCX3 659 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 LHX9Q9NQ69 397 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 WDR70Q9NW82 654 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 AHSPQ9NZD4 102 aa13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.87□□□□□ -0.19
SCAMP4-209ENST00000585335 A0A0A6YYC8 382 aaPredicted RBP13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 A0A1B0GTL3 188 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 MAGEB17A8MXT2 336 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 H0YIG0 161 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 I3L1I5 382 aaPredicted RBP13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 RRP8O43159 456 aaKnown RBP13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 ERI3O43414 337 aaKnown RBP13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 NSA2O95478 260 aaKnown RBP13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 TGFB1P01137 390 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 CHRNGP07510 517 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 NEK2P51955 445 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 RPS13P62277 151 aaKnown RBP13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 CUL3Q13618 768 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 IMPG1Q17R60 797 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 NKAIN1Q4KMZ8 207 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 SH2D4BQ5SQS7 431 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 DEPDC1Q5TB30 811 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 ARHGAP40Q5TG30 622 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 CLYBLQ8N0X4 340 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 SLC38A9Q8NBW4 561 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 UTP15Q8TED0 518 aaKnown RBP13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 MS4A6EQ96DS6 147 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 RNF31Q96EP0 1072 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 F2RL3Q96RI0 385 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 TBCDQ9BTW9 1192 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 EFHD1Q9BUP0 239 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 DPH1Q9BZG8 443 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 SPRY4Q9C004 299 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 FAM117AQ9C073 453 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 CLK4Q9HAZ1 481 aaKnown RBP13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 IFT80Q9P2H3 777 aaPredicted RBP13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 ZNF225Q9UK10 706 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 SLC12A4Q9UP95 1085 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 TRAF6Q9Y4K3 522 aa13.86□□□□□ -0.19
SCAMP4-209ENST00000585335 TEX51A0A1B0GUA7 166 aa13.85□□□□□ -0.19
SCAMP4-209ENST00000585335 C21orf140B9A014 251 aa13.85□□□□□ -0.19
SCAMP4-209ENST00000585335 KLF11O14901 512 aa13.85□□□□□ -0.19
SCAMP4-209ENST00000585335 KLHL18O94889 574 aa13.85□□□□□ -0.19
SCAMP4-209ENST00000585335 SEMA3DO95025 777 aa13.85□□□□□ -0.19
SCAMP4-209ENST00000585335 PDYNP01213 254 aa13.85□□□□□ -0.19
SCAMP4-209ENST00000585335 FGF4P08620 206 aa13.85□□□□□ -0.19
SCAMP4-209ENST00000585335 IL1RNP18510 177 aa13.85□□□□□ -0.19
SCAMP4-209ENST00000585335 HNRNPH1P31943 449 aaKnown RBP13.85□□□□□ -0.19
SCAMP4-209ENST00000585335 STAT5AP42229 794 aa13.85□□□□□ -0.19
SCAMP4-209ENST00000585335 SSR2P43308 183 aa13.85□□□□□ -0.19
SCAMP4-209ENST00000585335 TSFMP43897 325 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms