RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 ACSS3Q9H6R3 686 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 EPS8L2Q9H6S3 715 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 PTBP2Q9UKA9 531 aaKnown RBP19.29■□□□□ 0.68
SS18-224ENST00000584083 A0A087X1B8 175 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 A0A1W2PQ72 361 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 OR2W5A6NFC9 320 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 CHST10O43529 356 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 CCNT2O60583 730 aaKnown RBP19.28■□□□□ 0.68
SS18-224ENST00000584083 SERPINA7P05543 415 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 SERPINA6P08185 405 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 CYC1P08574 325 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 PRR35P0CG20 571 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 IL10P22301 178 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 KCNC1P48547 511 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 OLR1P78380 273 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 INPP5JQ15735 1006 aaPredicted RBP19.28■□□□□ 0.68
SS18-224ENST00000584083 PDK4Q16654 411 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 PRR30Q53SZ7 412 aaPredicted RBP19.28■□□□□ 0.68
SS18-224ENST00000584083 UBAP2Q5T6F2 1119 aaKnown RBP19.28■□□□□ 0.68
SS18-224ENST00000584083 LINC00696Q6ZRV3 163 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 LANCL3Q6ZV70 420 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 CCDC91Q7Z6B0 441 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.28■□□□□ 0.68
SS18-224ENST00000584083 CEP112Q8N8E3 955 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 TTLQ8NG68 377 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 KCTD4Q8WVF5 259 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 CCT6BQ92526 530 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 NXNL1Q96CM4 212 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 SLC6A16Q9GZN6 736 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 KLHL31Q9H511 634 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 SNX15Q9NRS6 342 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 IGSF5Q9NSI5 407 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 NUDT4Q9NZJ9 180 aa19.28■□□□□ 0.68
SS18-224ENST00000584083 C19orf25Q9UFG5 118 aaPredicted RBP19.28■□□□□ 0.68
SS18-224ENST00000584083 UBR5O95071 2799 aaPredicted RBP19.27■□□□□ 0.68
SS18-224ENST00000584083 IGHV3-20A0A0C4DH32 117 aa19.27■□□□□ 0.68
SS18-224ENST00000584083 UBXN8O00124 270 aa19.27■□□□□ 0.68
SS18-224ENST00000584083 VPS4BO75351 444 aa19.27■□□□□ 0.68
SS18-224ENST00000584083 CDC123O75794 336 aaPredicted RBP19.27■□□□□ 0.68
SS18-224ENST00000584083 WFS1O76024 890 aa19.27■□□□□ 0.68
SS18-224ENST00000584083 C2P06681 752 aa19.27■□□□□ 0.68
SS18-224ENST00000584083 ICAM2P13598 275 aa19.27■□□□□ 0.68
SS18-224ENST00000584083 PCOLCEQ15113 449 aa19.27■□□□□ 0.68
SS18-224ENST00000584083 XKR6Q5GH73 641 aa19.27■□□□□ 0.68
SS18-224ENST00000584083 CPEB2Q7Z5Q1 589 aaKnown RBP19.27■□□□□ 0.68
SS18-224ENST00000584083 IQCKQ8N0W5 287 aa19.27■□□□□ 0.68
SS18-224ENST00000584083 CREB3L4Q8TEY5 395 aa19.27■□□□□ 0.68
SS18-224ENST00000584083 TBC1D20Q96BZ9 403 aa19.27■□□□□ 0.68
SS18-224ENST00000584083 OR1F2PQ96R84 312 aa19.27■□□□□ 0.68
SS18-224ENST00000584083 WDR77Q9BQA1 342 aaPredicted RBP19.27■□□□□ 0.68
SS18-224ENST00000584083 TUBB6Q9BUF5 446 aa19.27■□□□□ 0.68
SS18-224ENST00000584083 CD244Q9BZW8 370 aa19.27■□□□□ 0.68
SS18-224ENST00000584083 PTGFRNQ9P2B2 879 aa19.27■□□□□ 0.68
SS18-224ENST00000584083 VPS4AQ9UN37 437 aa19.27■□□□□ 0.68
SS18-224ENST00000584083 IKBKGQ9Y6K9 419 aa19.27■□□□□ 0.68
SS18-224ENST00000584083 SHANK1Q9Y566 2161 aa19.27■□□□□ 0.68
SS18-224ENST00000584083 RP1L1Q8IWN7 2480 aaPredicted RBP19.27■□□□□ 0.67
SS18-224ENST00000584083 PRRC2CQ9Y520 2896 aaKnown RBP19.26■□□□□ 0.67
SS18-224ENST00000584083 HMX2A2RU54 273 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 ANKDD1BA6NHY2 528 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 KERAO60938 352 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 DNAJB6O75190 326 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 SEC24DO94855 1032 aaPredicted RBP19.26■□□□□ 0.67
SS18-224ENST00000584083 CELA2AP08217 269 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 INHBAP08476 426 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 TYK2P29597 1187 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 AGTR2P50052 363 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 SERPINB8P50452 374 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 STXBP1P61764 594 aaKnown RBP19.26■□□□□ 0.67
SS18-224ENST00000584083 AP2B1P63010 937 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 IRF9Q00978 393 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 HYAL2Q12891 473 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 MFAP5Q13361 173 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 FAM83EQ2M2I3 478 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 CRB2Q5IJ48 1285 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 IGFL2Q6UWQ7 119 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 RIPOR1Q6ZS17 1223 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 Q6ZS92 163 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 SIRT6Q8N6T7 355 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 DNAJB14Q8TBM8 379 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 BRIX1Q8TDN6 353 aaKnown RBP19.26■□□□□ 0.67
SS18-224ENST00000584083 LMF1Q96S06 567 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 ATOH8Q96SQ7 321 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 PITHD1Q9GZP4 211 aaPredicted RBP19.26■□□□□ 0.67
SS18-224ENST00000584083 EHD1Q9H4M9 534 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 NT5DC2Q9H857 520 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 PRM3Q9NNZ6 103 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 CSAG2Q9Y5P2 127 aa19.26■□□□□ 0.67
SS18-224ENST00000584083 A0A096LPK6 155 aa19.25■□□□□ 0.67
SS18-224ENST00000584083 SYCE1LA8MT33 242 aa19.25■□□□□ 0.67
SS18-224ENST00000584083 B4GALT2O60909 372 aa19.25■□□□□ 0.67
SS18-224ENST00000584083 FHP07954 510 aa19.25■□□□□ 0.67
SS18-224ENST00000584083 SMIM10L1P0DMW3 83 aa19.25■□□□□ 0.67
SS18-224ENST00000584083 GLRBP48167 497 aa19.25■□□□□ 0.67
SS18-224ENST00000584083 IRF8Q02556 426 aa19.25■□□□□ 0.67
SS18-224ENST00000584083 ACTN3Q08043 901 aaPredicted RBP19.25■□□□□ 0.67
SS18-224ENST00000584083 DOC2AQ14183 400 aa19.25■□□□□ 0.67
SS18-224ENST00000584083 ABRAXAS2Q15018 415 aa19.25■□□□□ 0.67
SS18-224ENST00000584083 NSDHLQ15738 373 aa19.25■□□□□ 0.67
SS18-224ENST00000584083 LRRC70Q7Z2Q7 622 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms