RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 C1QTNF3-AMACRE9PGA6 284 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 LILRB5O75023 590 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 MITFO75030 526 aaPredicted RBP13.14□□□□□ -0.31
SRSF1-205ENST00000582730 JUNBP17275 347 aaPredicted RBP13.14□□□□□ -0.31
SRSF1-205ENST00000582730 KDELR2P33947 212 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 MC1RQ01726 317 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 TAP2Q03519 686 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 CNTN1Q12860 1018 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.14□□□□□ -0.31
SRSF1-205ENST00000582730 XAF1Q6GPH4 301 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 COMMD6Q7Z4G1 85 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 OR5AR1Q8NGP9 310 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 SLC5A11Q8WWX8 675 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 HSH2DQ96JZ2 352 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 FCRL1Q96LA6 429 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 MBOAT4Q96T53 435 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 RAD21L1Q9H4I0 556 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 RIBC2Q9H4K1 309 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 PCDHB11Q9Y5F2 797 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 DGKBQ9Y6T7 804 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 MYO9BQ13459 2157 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 C1GALT1C1LP0DN25 315 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 NR4A1P22736 598 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 P2RY2P41231 377 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 CRATP43155 626 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 ARHGDIAP52565 204 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 ZNF33BQ06732 778 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 GAB1Q13480 694 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 GTF2IRD2BQ6EKJ0 949 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 GTF2IRD2Q86UP8 949 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 HEATR4Q86WZ0 1026 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 CADM3Q8N126 398 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 OR52E4Q8NGH9 312 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 SGCDQ92629 289 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 ZNF347Q96SE7 839 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 BARD1Q99728 777 aaKnown RBP13.14□□□□□ -0.31
SRSF1-205ENST00000582730 MROQ9BYG7 248 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 RPS6KA6Q9UK32 745 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 UNC80Q8N2C7 3258 aa13.14□□□□□ -0.31
SRSF1-205ENST00000582730 IDSP22304 550 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 PNLIPRP1P54315 467 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 RAD23AP54725 363 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 CYP4F2P78329 520 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 PIGFQ07326 219 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 FOXD4Q12950 439 aaPredicted RBP13.13□□□□□ -0.31
SRSF1-205ENST00000582730 GAB4Q2WGN9 574 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 BROXQ5VW32 411 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 FAM180BQ6P0A1 224 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 CCDC80Q76M96 950 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 PIWIL3Q7Z3Z3 882 aaKnown RBP13.13□□□□□ -0.31
SRSF1-205ENST00000582730 R3HCC1LQ7Z5L2 792 aaKnown RBP13.13□□□□□ -0.31
SRSF1-205ENST00000582730 PTOV1Q86YD1 416 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 HIPK1Q86Z02 1210 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 WDR48Q8TAF3 677 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 CHTF18Q8WVB6 975 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 SH3YL1Q96HL8 342 aaPredicted RBP13.13□□□□□ -0.31
SRSF1-205ENST00000582730 FAM83CQ9BQN1 747 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 EFCAB11Q9BUY7 163 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 EPHX3Q9H6B9 360 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 RBMX2Q9Y388 322 aaKnown RBP13.13□□□□□ -0.31
SRSF1-205ENST00000582730 KDM1AO60341 852 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 FABP3P05413 133 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 KLK1P06870 262 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 GPX2P18283 190 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 IGFBP5P24593 272 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 IL5RAQ01344 420 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 ZNF763Q0D2J5 394 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 C2orf80Q0P641 193 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 EPS8Q12929 822 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 SIM2Q14190 667 aaPredicted RBP13.13□□□□□ -0.31
SRSF1-205ENST00000582730 SPCS2Q15005 226 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 EIF4HQ15056 248 aaKnown RBP13.13□□□□□ -0.31
SRSF1-205ENST00000582730 OR2T5Q6IEZ7 315 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 ERICH5Q6P6B1 374 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 ARMCX6Q7L4S7 300 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 DSG4Q86SJ6 1040 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 SNX29P2Q8IUI4 249 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 OR2T29Q8NH02 315 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 HHIPQ96QV1 700 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 MYOCQ99972 504 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 SORBS1Q9BX66 1292 aaKnown RBP13.13□□□□□ -0.31
SRSF1-205ENST00000582730 CCDC90BQ9GZT6 254 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 ITM2CQ9NQX7 267 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 TM7SF3Q9NS93 570 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 KIF17Q9P2E2 1029 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 ACSL6Q9UKU0 697 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 SAMHD1Q9Y3Z3 626 aaKnown RBP13.13□□□□□ -0.31
SRSF1-205ENST00000582730 LOC100130705A0A1B0GUX0 176 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 CLDN25C9JDP6 229 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 PTGES3LE9PB15 166 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 C5orf67F2Z3F1 127 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 SOAT1P35610 550 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 PLA2G16P53816 162 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 VLDLRP98155 873 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 AQP6Q13520 282 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 CAMK2GQ13555 558 aaPredicted RBP13.13□□□□□ -0.31
SRSF1-205ENST00000582730 ZNF385BQ569K4 471 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 PRAMEF14Q5SWL7 426 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 PRAMEF13Q5VWM6 474 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 TANGO2Q6ICL3 276 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms