RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ACTR3BQ9P1U1 418 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 ABCD2Q9UBJ2 740 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 EGFL7Q9UHF1 273 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 MAGEL2Q9UJ55 1249 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 CORO2BQ9UQ03 480 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 AURKCQ9UQB9 309 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 WBP11Q9Y2W2 641 aaKnown RBP8.91□□□□□ -0.98
SS18-220ENST00000582092 TSC22D4Q9Y3Q8 395 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 PCDHA9Q9Y5H5 950 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 PCYT1BQ9Y5K3 369 aaPredicted RBP8.91□□□□□ -0.98
SS18-220ENST00000582092 KNL1Q8NG31 2342 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 CABIN1Q9Y6J0 2220 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 PRSS51A0A1B0GVH4 220 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 H0Y8X5 98 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 SAP18O00422 153 aaKnown RBP8.9□□□□□ -0.98
SS18-220ENST00000582092 ACOT8O14734 319 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 SCAMP2O15127 329 aaKnown RBP8.9□□□□□ -0.98
SS18-220ENST00000582092 ZW10O43264 779 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 HNRNPRO43390 633 aaKnown RBP8.9□□□□□ -0.98
SS18-220ENST00000582092 GUCY1B2O75343 617 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 KLK1P06870 262 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 ERGP11308 486 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 FCGR1AP12314 374 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 F3P13726 295 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 ACADSP16219 412 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 CSRP1P21291 193 aaKnown RBP8.9□□□□□ -0.98
SS18-220ENST00000582092 CD27P26842 260 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 AK4P27144 223 aaPredicted RBP8.9□□□□□ -0.98
SS18-220ENST00000582092 MAOBP27338 520 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 GSTM2P28161 218 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 HTR1EP28566 365 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 PKLRP30613 574 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 SLC7A1P30825 629 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 AFF3P51826 1226 aaKnown RBP8.9□□□□□ -0.98
SS18-220ENST00000582092 CYP4F2P78329 520 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 RHDQ02161 417 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 PRDX1Q06830 199 aaKnown RBP8.9□□□□□ -0.98
SS18-220ENST00000582092 SLC14A1Q13336 389 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 SUZ12Q15022 739 aaKnown RBP8.9□□□□□ -0.98
SS18-220ENST00000582092 MTX3Q5HYI7 312 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 RABL3Q5HYI8 236 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 TBCELQ5QJ74 424 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 GLYATQ6IB77 296 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 OR4F3Q6IEY1 312 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 C8orf82Q6P1X6 216 aaPredicted RBP8.9□□□□□ -0.98
SS18-220ENST00000582092 DNAJC14Q6Y2X3 702 aaPredicted RBP8.9□□□□□ -0.98
SS18-220ENST00000582092 GCNT7Q6ZNI0 430 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 COMMD6Q7Z4G1 85 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 SPPL2CQ8IUH8 684 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 TMEM126BQ8IUX1 230 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 METTL4Q8N3J2 472 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 NATD1Q8N6N6 113 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 TRIML2Q8N7C3 387 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 GOLM1Q8NBJ4 401 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 TMEM145Q8NBT3 493 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 SRFBP1Q8NEF9 429 aaKnown RBP8.9□□□□□ -0.98
SS18-220ENST00000582092 ABHD11Q8NFV4 315 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 OR2T12Q8NG77 320 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 OR7A2PQ8NGA2 310 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 GTF2H4Q92759 462 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 NCLNQ969V3 563 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 FAM162AQ96A26 154 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 BIRC7Q96CA5 298 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 SLC45A3Q96JT2 553 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 TMEM74Q96NL1 305 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 TMEM168Q9H0V1 697 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 ACTL8Q9H568 366 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 REEP4Q9H6H4 257 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 COPS7BQ9H9Q2 264 aaPredicted RBP8.9□□□□□ -0.98
SS18-220ENST00000582092 CAPN10Q9HC96 672 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 CD93Q9NPY3 652 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 SLC52A3Q9NQ40 469 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 RXFP3Q9NSD7 469 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 OR6C2Q9NZP2 312 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 TBC1D29Q9UFV1 150 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 MCM8Q9UJA3 840 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 VPS4AQ9UN37 437 aa8.9□□□□□ -0.98
SS18-220ENST00000582092 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.9□□□□□ -0.98
SS18-220ENST00000582092 DOCK9Q9BZ29 2069 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 MYO15AQ9UKN7 3530 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 A0A1W2PPC4 97 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 TRBC2A0A5B9 178 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 DHRS12A0PJE2 317 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 ELOVL7A1L3X0 281 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 ASPDHA6ND91 283 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 CDX4O14627 284 aaPredicted RBP8.89□□□□□ -0.99
SS18-220ENST00000582092 ARPC2O15144 300 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 DFNA5O60443 496 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 CLEC3AO75596 197 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 SEMA3DO95025 777 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 GPIP06744 558 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 ANXA6P08133 673 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 RPSAP08865 295 aaKnown RBP8.89□□□□□ -0.99
SS18-220ENST00000582092 CEACAM1P13688 526 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 TACR1P25103 407 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 PSMB5P28074 263 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 SOX11P35716 441 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 GSTM5P46439 218 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 ZFP36L2P47974 494 aaKnown RBP8.89□□□□□ -0.99
SS18-220ENST00000582092 NOVA1P51513 510 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms