RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	ZCCHC10	Q8TBK6	192 aa		11.88	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	DNAJB14	Q8TBM8	379 aa		11.88	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	M1AP	Q8TC57	530 aa		11.88	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	PSMF1	Q92530	271 aa		11.88	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	TBC1D20	Q96BZ9	403 aa		11.88	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	SNRNP40	Q96DI7	357 aa	Known RBP	11.88	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	SMIM10	Q96HG1	83 aa		11.88	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	TSNARE1	Q96NA8	513 aa		11.88	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	MACROD1	Q9BQ69	325 aa		11.88	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	EFCAB11	Q9BUY7	163 aa		11.88	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	NPL	Q9BXD5	320 aa	Predicted RBP	11.88	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	FUT8	Q9BYC5	575 aa		11.88	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	WWOX	Q9NZC7	414 aa		11.88	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	HCN3	Q9P1Z3	774 aa		11.88	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	PTBP2	Q9UKA9	531 aa	Known RBP	11.88	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	RNF112	Q9ULX5	631 aa		11.88	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	ACOT9	Q9Y305	439 aa		11.88	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	COPG1	Q9Y678	874 aa	Known RBP	11.88	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	COL12A1	Q99715	3063 aa		11.88	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708		A0A087X1B8	175 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	SYCE1L	A8MT33	242 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	MASP2	O00187	686 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	FFAR3	O14843	346 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	GPR42	O15529	346 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	PHGDH	O43175	533 aa	Known RBP	11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	CLEC3A	O75596	197 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	STATH	P02808	62 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	FH	P07954	510 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	LTA4H	P09960	611 aa	Known RBP	11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	ZNF888	P0CJ79	500 aa	Predicted RBP	11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	SLC35E2B	P0CK96	405 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	RNH1	P13489	461 aa	Known RBP	11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	CASP2	P42575	452 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	SLC7A5	Q01650	507 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	RHAG	Q02094	409 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	EEF1A2	Q05639	463 aa	Known RBP	11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	E2F2	Q14209	437 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	RBBP5	Q15291	538 aa	Known RBP	11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	TRADD	Q15628	312 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	TBCC	Q15814	346 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	PDK4	Q16654	411 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	FAM83E	Q2M2I3	478 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	DEFB134	Q4QY38	66 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	PAGE2B	Q5JRK9	111 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	MFSD4B	Q5TF39	518 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	METTL2B	Q6P1Q9	378 aa	Known RBP	11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	QSOX2	Q6ZRP7	698 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	RAPH1	Q70E73	1250 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	LRRC70	Q7Z2Q7	622 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	ADAMTS18	Q8TE60	1221 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	UTP15	Q8TED0	518 aa	Known RBP	11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	CREB3L4	Q8TEY5	395 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	UBE2E3	Q969T4	207 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	GAL3ST3	Q96A11	431 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	MOCOS	Q96EN8	888 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	PTCD3	Q96EY7	689 aa	Known RBP	11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	CD244	Q9BZW8	370 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	SPNS1	Q9H2V7	528 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	ZBTB20	Q9HC78	741 aa	Predicted RBP	11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	LANCL2	Q9NS86	450 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	NUDT4	Q9NZJ9	180 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	CD274	Q9NZQ7	290 aa		11.87	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	SPTAN1	Q13813	2472 aa	Known RBP	11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	ESPL1	Q14674	2120 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	TRAV17	A0A0B4J275	112 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	CTAGE15	A4D2H0	777 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	ANKDD1B	A6NHY2	528 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	PSMD12	O00232	456 aa	Predicted RBP	11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	TAPBP	O15533	448 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	CHST10	O43529	356 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	KERA	O60938	352 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	JRK	O75564	520 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	SERPIND1	P05546	499 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	CTAGE8	P0CG41	777 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	SERPINB1	P30740	379 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	GDF5	P43026	501 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	SNRPN	P63162	240 aa	Known RBP	11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	HYAL2	Q12891	473 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	SLBP	Q14493	270 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	SLMAP	Q14BN4	828 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	OR4D1	Q15615	310 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	NSDHL	Q15738	373 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	HIST2H2AC	Q16777	129 aa	Predicted RBP	11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	ADPRM	Q3LIE5	342 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	FHL5	Q5TD97	284 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	ABHD17B	Q5VST6	288 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	HIST2H2AA3	Q6FI13	130 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	FAAH2	Q6GMR7	532 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	H3F3C	Q6NXT2	135 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	ANKRD37	Q7Z713	158 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	ISCA2	Q86U28	154 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	CTAGE6	Q86UF2	777 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	CTAGE4	Q8IX94	777 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	LGI4	Q8N135	537 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	C7orf57	Q8NEG2	295 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	BRIX1	Q8TDN6	353 aa	Known RBP	11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	UBTD2	Q8WUN7	234 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	PEX11G	Q96HA9	241 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	FAR2	Q96K12	515 aa		11.86	□□□□□ -0.51
CDK5RAP3-222	ENST00000581708	LPAR4	Q99677	370 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms