RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 SPASTQ9UBP0 616 aa17.08■□□□□ 0.32
EIF4A1-216ENST00000580888 RUVBL1Q9Y265 456 aaKnown RBP17.08■□□□□ 0.32
EIF4A1-216ENST00000580888 MAN2B2Q9Y2E5 1009 aa17.08■□□□□ 0.32
EIF4A1-216ENST00000580888 PLEKHM1Q9Y4G2 1056 aa17.08■□□□□ 0.32
EIF4A1-216ENST00000580888 TLX3O43711 291 aaPredicted RBP17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 ANP32DO95626 131 aa17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 EIF2S3P41091 472 aaKnown RBP17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 EEFSECP57772 596 aaKnown RBP17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 PWP1Q13610 501 aa17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 NFYCQ13952 458 aa17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 SLBPQ14493 270 aaKnown RBP eCLIP17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 KIF26BQ2KJY2 2108 aa17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 TIGD2Q4W5G0 525 aa17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 C6orf10Q5SRN2 563 aa17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 IRAK1BP1Q5VVH5 260 aa17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 GALNT18Q6P9A2 607 aa17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 RNF111Q6ZNA4 994 aa17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 TMPRSS11BQ86T26 416 aa17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 HID1Q8IV36 788 aa17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 OR4K1Q8NGD4 311 aa17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 DNAJB8Q8NHS0 232 aa17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 HUS1BQ8NHY5 278 aa17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 GTF2H4Q92759 462 aa17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 UBE2E3Q969T4 207 aa17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 ZUFSPQ96AP4 578 aa17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 ANKRD27Q96NW4 1050 aa17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 SLC39A3Q9BRY0 314 aa17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 PITHD1Q9GZP4 211 aaPredicted RBP17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 PNMA8BQ9ULN7 279 aaPredicted RBP17.07■□□□□ 0.32
EIF4A1-216ENST00000580888 TRBV5-3A0A0A0MS03 114 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 PIPSLA2A3N6 862 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 EME2A4GXA9 379 aaPredicted RBP17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 MAGEB17A8MXT2 336 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 LMO7DNF2Z398 122 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 PRICKLE3O43900 615 aaPredicted RBP17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 ETHE1O95571 254 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 C8BP07358 591 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 HOXB3P14651 431 aaPredicted RBP17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 TACR1P25103 407 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 PKLRP30613 574 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 PTDSS1P48651 473 aaKnown RBP17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 YBX1P67809 324 aaKnown RBP17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 RAE1P78406 368 aaKnown RBP17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 FLOT2Q14254 428 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 RPE65Q16518 533 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 HIST2H2ACQ16777 129 aaPredicted RBP17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 HIST2H2AA3Q6FI13 130 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 ZFP1Q6P2D0 407 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 SLC2A7Q6PXP3 512 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 PTRH1Q86Y79 214 aaKnown RBP17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 PHACTR4Q8IZ21 702 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 RNF175Q8N4F7 328 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 LMNTD1Q8N9Z9 388 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 OR2L8Q8NGY9 312 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 LMX1AQ8TE12 382 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 NRG4Q8WWG1 115 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 SLC13A3Q8WWT9 602 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 C12orf66Q96MD2 445 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 DEPDC7Q96QD5 511 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 RAB11FIP5Q9BXF6 653 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 RHBGQ9H310 441 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 MUC13Q9H3R2 512 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 SLAMF8Q9P0V8 285 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 APOBEC3BQ9UH17 382 aaKnown RBP17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 ADGRE2Q9UHX3 823 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 PLAGL1Q9UM63 463 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 KCNK6Q9Y257 313 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 AK5Q9Y6K8 562 aa17.06■□□□□ 0.32
EIF4A1-216ENST00000580888 ARHGEF17Q96PE2 2063 aaPredicted RBP17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 TCRBV3S1A0A5B6 114 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 PGRP06401 933 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 HOXB9P17482 250 aaPredicted RBP17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 RPL10P27635 214 aaKnown RBP17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 DGKQP52824 942 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 PHC1P78364 1004 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 BNIP2Q12982 314 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 SPANXN4Q5MJ08 99 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 LRIF1Q5T3J3 769 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 NANOGP8Q6NSW7 305 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 DHDDSQ86SQ9 333 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 KRTCAP2Q8N6L1 136 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 RNF148Q8N7C7 305 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 LINC01555Q8NAE3 123 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 GOLM1Q8NBJ4 401 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 IFI44Q8TCB0 444 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 SLC26A7Q8TE54 656 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 NUDT8Q8WV74 236 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 FERD3LQ96RJ6 166 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 MTERF1Q99551 399 aaKnown RBP17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 LRRC61Q9BV99 259 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 SPNS1Q9H2V7 528 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 TCEAL2Q9H3H9 227 aaPredicted RBP17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 KIR3DX1Q9H7L2 352 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 NANOGQ9H9S0 305 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 CARS2Q9HA77 564 aaKnown RBP17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 DMRT3Q9NQL9 472 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 NMRK1Q9NWW6 199 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 MAPRE3Q9UPY8 281 aa17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 TDRKHQ9Y2W6 561 aaKnown RBP17.05■□□□□ 0.32
EIF4A1-216ENST00000580888 LRRC42Q9Y546 428 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms