RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 BDH2Q9BUT1 245 aa12.92□□□□□ -0.34
CSNK1D-211ENST00000579316 HAT1O14929 419 aa12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 CRLF1O75462 422 aa12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 CCNDBP1O95273 360 aa12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 TUBB4AP04350 444 aa12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 TACR1P25103 407 aa12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 RPA3P35244 121 aaPredicted RBP12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 GPR85P60893 370 aa12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 PPIAP62937 165 aaKnown RBP12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 C1orf185Q5T7R7 199 aa12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 FBXW10Q5XX13 1052 aa12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 ICE2Q659A1 982 aa12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 TMEM214Q6NUQ4 689 aaKnown RBP12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 KIAA0408Q6ZU52 694 aa12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 VN1R4Q7Z5H5 301 aa12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 SLC13A5Q86YT5 568 aaPredicted RBP12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 REXO1L1PQ8IX06 675 aa12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 OR13J1Q8NGT2 312 aa12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 GSDMBQ8TAX9 411 aa12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 LRRC46Q96FV0 321 aa12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 ATG10Q9H0Y0 220 aa12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 DEPPQ9NTK1 212 aa12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 TRMT1Q9NXH9 659 aaKnown RBP12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 FOXD3Q9UJU5 478 aaPredicted RBP12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 RUVBL2Q9Y230 463 aaKnown RBP12.91□□□□□ -0.34
CSNK1D-211ENST00000579316 H7C0C1 242 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 SGK494L7N484 410 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 ACOT7O00154 380 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 AQP7O14520 342 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 GLSO94925 669 aaPredicted RBP12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 IL1RNP18510 177 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 ATP5OP48047 213 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 ABATP80404 500 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 ARHGAP19Q14CB8 494 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 AFTPHQ6ULP2 937 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 ZNF534Q76KX8 674 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 TRILQ7L0X0 811 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 PDSS2Q86YH6 399 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 CDKL3Q8IVW4 592 aaPredicted RBP12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 KRT222Q8N1A0 295 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 ARMC2Q8NEN0 867 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 NFAM1Q8NET5 270 aaPredicted RBP12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 ACTL9Q8TC94 416 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 FOPNLQ96NB1 174 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 PIP5K1AQ99755 562 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 TIMMDC1Q9NPL8 285 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 JRKLQ9Y4A0 524 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 LIPGQ9Y5X9 500 aa12.9□□□□□ -0.34
CSNK1D-211ENST00000579316 ARHGAP21Q5T5U3 1957 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 KCNE1BA0A087WTH5 132 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 PINLYPA6NC86 204 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 TUBAL3A6NHL2 446 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 SAGE2PA6NJ88 616 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 CLCA1A8K7I4 914 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 HSPB2A8KAH6 182 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 FAM166BA8MTA8 275 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 MYO1CO00159 1063 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 SMAD7O15105 426 aaKnown RBP12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 RDH16O75452 317 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 CDC123O75794 336 aaPredicted RBP12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 STK10O94804 968 aaKnown RBP12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 MATN4O95460 622 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 GOT2P00505 430 aaKnown RBP12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 HRGP04196 525 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 MEF2AQ02078 507 aaPredicted RBP12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 SEMA3AQ14563 771 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 HSPB2Q16082 182 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 CATSPEREQ5SY80 951 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 AADACL2Q6P093 401 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 SUSD1Q6UWL2 747 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 SLC22A16Q86VW1 577 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 PLD3Q8IV08 490 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 P3H2Q8IVL5 708 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 OR2M7Q8NG81 312 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 OR9A1PQ8NGU1 263 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 SKA2Q8WVK7 121 aaPredicted RBP12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 ZNF592Q92610 1267 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 Q96MF0 132 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 EBNA1BP2Q99848 306 aaKnown RBP12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 DEFB126Q9BYW3 111 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 TAC3Q9UHF0 121 aa12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.89□□□□□ -0.35
CSNK1D-211ENST00000579316 SCN3AQ9NY46 2000 aa12.88□□□□□ -0.35
CSNK1D-211ENST00000579316 A0A1W2PPR1 153 aa12.88□□□□□ -0.35
CSNK1D-211ENST00000579316 PRMT5O14744 637 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-211ENST00000579316 KPNA5O15131 536 aa12.88□□□□□ -0.35
CSNK1D-211ENST00000579316 SUSD5O60279 629 aa12.88□□□□□ -0.35
CSNK1D-211ENST00000579316 F12P00748 615 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-211ENST00000579316 GABRA1P14867 456 aa12.88□□□□□ -0.35
CSNK1D-211ENST00000579316 PPARGP37231 505 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-211ENST00000579316 EIF3EP60228 445 aaKnown RBP12.88□□□□□ -0.35
CSNK1D-211ENST00000579316 ACVR1Q04771 509 aa12.88□□□□□ -0.35
CSNK1D-211ENST00000579316 ANKRD20A4Q4UJ75 823 aa12.88□□□□□ -0.35
CSNK1D-211ENST00000579316 NDUFAF5Q5TEU4 345 aa12.88□□□□□ -0.35
CSNK1D-211ENST00000579316 C16orf47Q6ZP98 133 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-211ENST00000579316 TMEM156Q8N614 296 aa12.88□□□□□ -0.35
CSNK1D-211ENST00000579316 PSD4Q8NDX1 1056 aa12.88□□□□□ -0.35
CSNK1D-211ENST00000579316 MAIP1Q8WWC4 291 aa12.88□□□□□ -0.35
CSNK1D-211ENST00000579316 PANX3Q96QZ0 392 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms