RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 ADCK2Q7Z695 626 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 DSELQ8IZU8 1212 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 NLGN4XQ8N0W4 816 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 METTL27Q8N6F8 245 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 ANKRD53Q8N9V6 530 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 ABHD11Q8NFV4 315 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 NLGN4YQ8NFZ3 816 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 GBP5Q96PP8 586 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 ZFYVE21Q9BQ24 234 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 SELENOSQ9BQE4 189 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 TRIM54Q9BYV2 358 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 DPH1Q9BZG8 443 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 AICDAQ9GZX7 198 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 CHST8Q9H2A9 424 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 ACTR5Q9H9F9 607 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 NMRAL1Q9HBL8 299 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 CD274Q9NZQ7 290 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 TMEM216Q9P0N5 145 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 CPSF2Q9P2I0 782 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 PSMC3IPQ9P2W1 217 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 XPR1Q9UBH6 696 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 STOML1Q9UBI4 398 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 CROTQ9UKG9 612 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 TLK1Q9UKI8 766 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 EMCNQ9ULC0 261 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 PPT2Q9UMR5 302 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 RUVBL1Q9Y265 456 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 IKBKGQ9Y6K9 419 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 FER1L5A0AVI2 2057 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 A0A1B0GTL3 188 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 FITM1A5D6W6 292 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 SUPT3HB4E1H0 165 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 C4orf51C9J302 202 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 MAP2K7O14733 419 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 FFAR3O14843 346 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 GPR42O15529 346 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 ZSCAN9O15535 394 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 RRP8O43159 456 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 KLK8O60259 260 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 SUPT3HO75486 399 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 FKBP9O95302 570 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 TBX6O95947 436 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 IGHA1P01876 353 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 EIF2S1P05198 315 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 EZRP15311 586 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 CNTFP26441 200 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 DNAJA1P31689 397 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 HNMTP50135 292 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 EFNA3P52797 238 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 ABATP80404 500 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 ACAP2Q15057 778 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 FAM83EQ2M2I3 478 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 TAF1BQ53T94 588 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 RHBDD2Q6NTF9 364 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 EMBQ6PCB8 327 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 PAOXQ6QHF9 649 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 TMPRSS11BQ86T26 416 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 C17orf64Q86WR6 236 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 TDRPQ86YL5 185 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 MRPL41Q8IXM3 137 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 MREGQ8N565 214 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 AMER2Q8N7J2 671 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 OR8K5Q8NH50 307 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 RHEBL1Q8TAI7 183 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 STAG3L4Q8TBR4 150 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 SLC5A11Q8WWX8 675 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 ATL1Q8WXF7 558 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 CLIP3Q96DZ5 547 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 TM4SF19Q96DZ7 209 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 CCNL2Q96S94 520 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 MESP1Q9BRJ9 268 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 CD244Q9BZW8 370 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 PRORYQ9H606 182 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 C7orf69Q9H7B7 122 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 FANCEQ9HB96 536 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 LHX9Q9NQ69 397 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 TMEM184CQ9NVA4 438 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 WWOXQ9NZC7 414 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 NUDT4Q9NZJ9 180 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 ANKMY1Q9P2S6 941 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 SERTAD3Q9UJW9 196 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 SNX7Q9UNH6 387 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 AHCTF1Q8WYP5 2266 aa9.01□□□□□ -0.97
NPLOC4-219ENST00000576713 PPP6CO00743 305 aa9□□□□□ -0.97
NPLOC4-219ENST00000576713 NKX2-8O15522 239 aa9□□□□□ -0.97
NPLOC4-219ENST00000576713 CCNT2O60583 730 aaKnown RBP9□□□□□ -0.97
NPLOC4-219ENST00000576713 DNAJA2O60884 412 aa9□□□□□ -0.97
NPLOC4-219ENST00000576713 DNAJB6O75190 326 aa9□□□□□ -0.97
NPLOC4-219ENST00000576713 CCNDBP1O95273 360 aa9□□□□□ -0.97
NPLOC4-219ENST00000576713 H2AFB1P0C5Y9 115 aa9□□□□□ -0.97
NPLOC4-219ENST00000576713 H2AFB2P0C5Z0 115 aa9□□□□□ -0.97
NPLOC4-219ENST00000576713 CREB1P16220 341 aa9□□□□□ -0.97
NPLOC4-219ENST00000576713 TCN2P20062 427 aa9□□□□□ -0.97
NPLOC4-219ENST00000576713 CCND1P24385 295 aa9□□□□□ -0.97
NPLOC4-219ENST00000576713 DLSTP36957 453 aa9□□□□□ -0.97
NPLOC4-219ENST00000576713 OR1D4P47884 311 aa9□□□□□ -0.97
NPLOC4-219ENST00000576713 CXADRP78310 365 aa9□□□□□ -0.97
NPLOC4-219ENST00000576713 REEP5Q00765 189 aa9□□□□□ -0.97
NPLOC4-219ENST00000576713 ABHD18Q0P651 414 aa9□□□□□ -0.97
NPLOC4-219ENST00000576713 CDC16Q13042 620 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms