RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 BGNP21810 368 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 GRK2P25098 689 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 AVPR1BP47901 424 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 NEK2P51955 445 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 SKP1P63208 163 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 TGM3Q08188 693 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 GALNT1Q10472 559 aaPredicted RBP13.29□□□□□ -0.28
RPAIN-217ENST00000575711 HYAL2Q12891 473 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 ARL13AQ5H913 290 aaPredicted RBP13.29□□□□□ -0.28
RPAIN-217ENST00000575711 ZNF385CQ66K41 422 aaPredicted RBP13.29□□□□□ -0.28
RPAIN-217ENST00000575711 NIPAL1Q6NVV3 410 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 TRIM40Q6P9F5 258 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 CHSY3Q70JA7 882 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 CUZD1Q86UP6 607 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 TRIM42Q8IWZ5 723 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 HOMEZQ8IX15 550 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 METTL27Q8N6F8 245 aaPredicted RBP13.29□□□□□ -0.28
RPAIN-217ENST00000575711 UTP15Q8TED0 518 aaKnown RBP13.29□□□□□ -0.28
RPAIN-217ENST00000575711 SELENOMQ8WWX9 145 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 ZCCHC14Q8WYQ9 949 aaKnown RBP13.29□□□□□ -0.28
RPAIN-217ENST00000575711 NKD1Q969G9 470 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 GAL3ST3Q96A11 431 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 MTFMTQ96DP5 389 aaKnown RBP13.29□□□□□ -0.28
RPAIN-217ENST00000575711 NAF1Q96HR8 494 aaKnown RBP13.29□□□□□ -0.28
RPAIN-217ENST00000575711 C17orf62Q9BQA9 187 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 CENPKQ9BS16 269 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 MS4A8Q9BY19 250 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 MRPS2Q9Y399 296 aaKnown RBP13.29□□□□□ -0.28
RPAIN-217ENST00000575711 A0A088AWK7 358 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 A0A0A6YYC8 382 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-217ENST00000575711 MAGEB17A8MXT2 336 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 TMEM114B3SHH9 223 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 C9J4A7 227 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 H0YIG0 161 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 I3L1I5 382 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-217ENST00000575711 MANBAO00462 879 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 RRP8O43159 456 aaKnown RBP13.28□□□□□ -0.28
RPAIN-217ENST00000575711 ERI3O43414 337 aaKnown RBP13.28□□□□□ -0.28
RPAIN-217ENST00000575711 FOXS1O43638 330 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 NSA2O95478 260 aaKnown RBP13.28□□□□□ -0.28
RPAIN-217ENST00000575711 CAPNS1P04632 268 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 UROSP10746 265 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 IL1RNP18510 177 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 TCN2P20062 427 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 NR1D1P20393 614 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 ZNF10P21506 573 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-217ENST00000575711 PTX3P26022 381 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-217ENST00000575711 HNRNPH1P31943 449 aaKnown RBP13.28□□□□□ -0.28
RPAIN-217ENST00000575711 STAT5AP42229 794 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 OR1D4P47884 311 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 RAB8AP61006 207 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 RPS13P62277 151 aaKnown RBP13.28□□□□□ -0.28
RPAIN-217ENST00000575711 STX3Q13277 289 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 CLN3Q13286 438 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 TGIF1Q15583 401 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 ADPRMQ3LIE5 342 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 NKAIN1Q4KMZ8 207 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 TMEM35AQ53FP2 167 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 SGO1Q5FBB7 561 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 ARHGAP40Q5TG30 622 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 ZNF517Q6ZMY9 492 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-217ENST00000575711 RNF175Q8N4F7 328 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 AFAP1L2Q8N4X5 818 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 DTWD1Q8N5C7 304 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 SRFBP1Q8NEF9 429 aaKnown RBP13.28□□□□□ -0.28
RPAIN-217ENST00000575711 OR2L5Q8NG80 312 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 OR6Y1Q8NGX8 325 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 COL26A1Q96A83 441 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 KIAA1143Q96AT1 154 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-217ENST00000575711 MS4A6EQ96DS6 147 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 MMABQ96EY8 250 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-217ENST00000575711 FAR2Q96K12 515 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 F2RL3Q96RI0 385 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 KCNA7Q96RP8 456 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 DPH1Q9BZG8 443 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 CHST8Q9H2A9 424 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 OR51B5Q9H339 312 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 KLHL31Q9H511 634 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 ZNF304Q9HCX3 659 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 PSD3Q9NYI0 1048 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 IFT80Q9P2H3 777 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-217ENST00000575711 GPN3Q9UHW5 284 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-217ENST00000575711 PPT2Q9UMR5 302 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 TIMM22Q9Y584 194 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 MAU2Q9Y6X3 613 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 NCOR2Q9Y618 2525 aa13.28□□□□□ -0.28
RPAIN-217ENST00000575711 AZIN1O14977 448 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 SH3BGRLO75368 114 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 ULK1O75385 1050 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 KLHL18O94889 574 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 SNUPNO95149 360 aaKnown RBP13.27□□□□□ -0.29
RPAIN-217ENST00000575711 HSPA4LO95757 839 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 TBX6O95947 436 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-217ENST00000575711 PDYNP01213 254 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 SMIM10L1P0DMW3 83 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 CHN1P15882 459 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 FBLP22087 321 aaKnown RBP13.27□□□□□ -0.29
RPAIN-217ENST00000575711 DLSTP36957 453 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 SLC1A6P48664 564 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 RAP1GDS1P52306 607 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms