RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 STK16O75716 305 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 SCELO95171 688 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 SLC35G6P0C7Q6 338 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 ZNF888P0CJ79 500 aaPredicted RBP8.19□□□□□ -1.1
SMG6-216ENST00000575176 ATXN8OSP0DMR3 200 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 ALOX12P18054 663 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 GNAZP19086 355 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 HNRNPFP52597 415 aaKnown RBP8.19□□□□□ -1.1
SMG6-216ENST00000575176 SLC12A2P55011 1212 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 OLR1P78380 273 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 SLC29A2Q14542 456 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 ACAP2Q15057 778 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 PCBP2Q15366 365 aaKnown RBP eCLIP8.19□□□□□ -1.13e-8■■□□□ 12.7
SMG6-216ENST00000575176 PDK4Q16654 411 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 DEFB134Q4QY38 66 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 TEX35Q5T0J7 233 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 CEP128Q6ZU80 1094 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 TBC1D1Q86TI0 1168 aaPredicted RBP8.19□□□□□ -1.1
SMG6-216ENST00000575176 IFT20Q8IY31 132 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 PRSS58Q8IYP2 241 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 CYP4X1Q8N118 509 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 GALNT16Q8N428 558 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 RNF175Q8N4F7 328 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 CAMKVQ8NCB2 501 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 STAG3L4Q8TBR4 150 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 AENQ8WTP8 325 aaKnown RBP8.19□□□□□ -1.1
SMG6-216ENST00000575176 ZNF473Q8WTR7 871 aaKnown RBP8.19□□□□□ -1.1
SMG6-216ENST00000575176 TSLPQ969D9 159 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 MIEF2Q96C03 454 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 MMABQ96EY8 250 aaPredicted RBP8.19□□□□□ -1.1
SMG6-216ENST00000575176 IMMP1LQ96LU5 166 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 NSUN5Q96P11 429 aaKnown RBP8.19□□□□□ -1.1
SMG6-216ENST00000575176 NPAS2Q99743 824 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 CRB3Q9BUF7 120 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 C1QTNF3Q9BXJ4 246 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 MS4A8Q9BY19 250 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 RBCK1Q9BYM8 510 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 TRIM54Q9BYV2 358 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 SLC7A5P2Q9GIP4 190 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 TRPC4Q9UBN4 977 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 C3orf18Q9UK00 162 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 PCTPQ9UKL6 214 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 RNF112Q9ULX5 631 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 TSC22D4Q9Y3Q8 395 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 KCNE2Q9Y6J6 123 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 EXOC1LA0A1B0GW35 172 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 A8MT66 165 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 SUPT3HB4E1H0 165 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 POC1B-GALNT4F8VUJ3 575 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 K7EPI3 171 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 SUPT3HO75486 399 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 CLEC3AO75596 197 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 ETHE1O95571 254 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 HPP00738 406 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 SERPINA6P08185 405 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 INHBAP08476 426 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 CYC1P08574 325 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 CNTFP26441 200 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 CASRP41180 1078 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 XCR1P46094 333 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 SERPINB9P50453 376 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 ALDH18A1P54886 795 aaKnown RBP8.18□□□□□ -1.1
SMG6-216ENST00000575176 C19orf57Q0VDD7 668 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 RAPSNQ13702 412 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 MYBPC3Q14896 1274 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 NADK2Q4G0N4 442 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 PRR30Q53SZ7 412 aaPredicted RBP8.18□□□□□ -1.1
SMG6-216ENST00000575176 GRHL2Q6ISB3 625 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 IGFL3Q6UXB1 125 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 TMIGD1Q6UXZ0 262 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 RAPH1Q70E73 1250 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 RPS27LQ71UM5 84 aaKnown RBP8.18□□□□□ -1.1
SMG6-216ENST00000575176 GOLGA7Q7Z5G4 137 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 PTRH1Q86Y79 214 aaKnown RBP8.18□□□□□ -1.1
SMG6-216ENST00000575176 SCUBE1Q8IWY4 988 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 CA13Q8N1Q1 262 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 OR52B6Q8NGF0 335 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 OR51Q1Q8NH59 317 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 WDR20Q8TBZ3 569 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 ZNF483Q8TF39 744 aaPredicted RBP8.18□□□□□ -1.1
SMG6-216ENST00000575176 GAL3ST3Q96A11 431 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 COL26A1Q96A83 441 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 PTCD3Q96EY7 689 aaKnown RBP8.18□□□□□ -1.1
SMG6-216ENST00000575176 SEC16BQ96JE7 1060 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 IP6K3Q96PC2 410 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 OR1F2PQ96R84 312 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 CSF3RQ99062 836 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 AIF1LQ9BQI0 150 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 ARHGAP9Q9BRR9 750 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 PITHD1Q9GZP4 211 aaPredicted RBP8.18□□□□□ -1.1
SMG6-216ENST00000575176 ZNF700Q9H0M5 742 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 PRDM7Q9NQW5 492 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 CD274Q9NZQ7 290 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 GPN3Q9UHW5 284 aaPredicted RBP8.18□□□□□ -1.1
SMG6-216ENST00000575176 DYRK1BQ9Y463 629 aa8.18□□□□□ -1.1
SMG6-216ENST00000575176 EML6Q6ZMW3 1958 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 A0A0G2JN53 185 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 CLEC18AA5D8T8 446 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 MKRN2OSH3BPM6 223 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 STX16-NPEPL1H3BU86 382 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms