RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 EPCAMP16422 314 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 HOXB8P17481 243 aaPredicted RBP8.22□□□□□ -1.09
RPAIN-215ENST00000575112 CLCN7P51798 805 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 PPP5CP53041 499 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 SLC16A1P53985 500 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 RAB15P59190 212 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 AP1S1P61966 158 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 EIF4EBP2Q13542 120 aaPredicted RBP8.22□□□□□ -1.09
RPAIN-215ENST00000575112 FXNQ16595 210 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 CCDC58Q4VC31 144 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 ARHGAP15Q53QZ3 475 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 FRG2Q64ET8 278 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 SBSNQ6UWP8 590 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 WASH2PQ6VEQ5 465 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 GDPD4Q6W3E5 623 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 ABI3BPQ7Z7G0 1075 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 TCAIMQ8N3R3 496 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 ASZ1Q8WWH4 475 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 FRG2BQ96QU4 278 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 SCN3BQ9NY72 215 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 CXXC1Q9P0U4 656 aaPredicted RBP8.22□□□□□ -1.09
RPAIN-215ENST00000575112 SLC13A4Q9UKG4 626 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 NAALAD2Q9Y3Q0 740 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 DYRK1BQ9Y463 629 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 PCDHB1Q9Y5F3 818 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 PLXNA4Q9HCM2 1894 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 FEZF1A0PJY2 475 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 SLC28A1O00337 649 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 NRG2O14511 850 aaPredicted RBP8.22□□□□□ -1.09
RPAIN-215ENST00000575112 NUAK1O60285 661 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 CCNKO75909 580 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 ACRV1P26436 265 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 NKX3-2P78367 333 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 FOXM1Q08050 763 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 CPZQ66K79 652 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 MMP21Q8N119 569 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 CDADC1Q9BWV3 514 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 THG1LQ9NWX6 298 aaKnown RBP8.22□□□□□ -1.09
RPAIN-215ENST00000575112 OSGIN1Q9UJX0 560 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 IFT52Q9Y366 437 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 ANKRD36A6QL64 1941 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 M0QX08 132 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 KMOO15229 486 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 LRRTM2O43300 516 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 POP4O95707 220 aaKnown RBP8.22□□□□□ -1.09
RPAIN-215ENST00000575112 ADH1AP07327 375 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 ATP1B2P14415 290 aaPredicted RBP8.22□□□□□ -1.09
RPAIN-215ENST00000575112 INPP1P49441 399 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 ERVFC1P60507 584 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 MXD1Q05195 221 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 DOC2AQ14183 400 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 SLBPQ14493 270 aaKnown RBP eCLIP8.22□□□□□ -1.09
RPAIN-215ENST00000575112 AGTRAPQ6RW13 159 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 TPRG1Q6ZUI0 275 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 ZNF683Q8IZ20 524 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 DCAF4L2Q8NA75 395 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 TRIB3Q96RU7 358 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 ZNF382Q96SR6 550 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 SDHCQ99643 169 aaPredicted RBP8.22□□□□□ -1.09
RPAIN-215ENST00000575112 RBM4BQ9BQ04 359 aaKnown RBP8.22□□□□□ -1.09
RPAIN-215ENST00000575112 CHCHD6Q9BRQ6 235 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 RBM4Q9BWF3 364 aaKnown RBP8.22□□□□□ -1.09
RPAIN-215ENST00000575112 SLC32A1Q9H598 525 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 ZDHHC3Q9NYG2 299 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 STOX2Q9P2F5 926 aaPredicted RBP8.22□□□□□ -1.09
RPAIN-215ENST00000575112 KCNE2Q9Y6J6 123 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 REV3LO60673 3130 aa8.22□□□□□ -1.09
RPAIN-215ENST00000575112 IGLV3-10A0A075B6K4 115 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.21□□□□□ -1.09
RPAIN-215ENST00000575112 MEN1O00255 615 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 PAK4O96013 591 aaPredicted RBP8.21□□□□□ -1.09
RPAIN-215ENST00000575112 IL6P05231 212 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 ETFAP13804 333 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 TNNI3P19429 210 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 DNAJB1P25685 340 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 FEN1P39748 380 aaKnown RBP8.21□□□□□ -1.09
RPAIN-215ENST00000575112 CCR2P41597 374 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 POLR2LP62875 67 aaKnown RBP8.21□□□□□ -1.09
RPAIN-215ENST00000575112 MED22Q15528 200 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 BCL7AQ4VC05 210 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 PPP2R2DQ66LE6 453 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 NOXRED1Q6NXP6 359 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 NEK5Q6P3R8 708 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 ARMCX6Q7L4S7 300 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 THOC6Q86W42 341 aaKnown RBP8.21□□□□□ -1.09
RPAIN-215ENST00000575112 STX19Q8N4C7 294 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 FYTTD1Q96QD9 318 aaKnown RBP8.21□□□□□ -1.09
RPAIN-215ENST00000575112 TRMT61BQ9BVS5 477 aaKnown RBP8.21□□□□□ -1.09
RPAIN-215ENST00000575112 DUSP21Q9H596 190 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 DDX28Q9NUL7 540 aaKnown RBP8.21□□□□□ -1.09
RPAIN-215ENST00000575112 TDP1Q9NUW8 608 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 GPR83Q9NYM4 423 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 FZD4Q9ULV1 537 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 DUSP12Q9UNI6 340 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 CHD7Q9P2D1 2997 aa8.21□□□□□ -1.09
RPAIN-215ENST00000575112 SPTBN5Q9NRC6 3674 aaKnown RBP8.21□□□□□ -1.09
RPAIN-215ENST00000575112 WASH4PA8MWX3 477 aa8.21□□□□□ -1.1
RPAIN-215ENST00000575112 TAF4O00268 1085 aa8.21□□□□□ -1.1
RPAIN-215ENST00000575112 SLC22A1O15245 554 aa8.21□□□□□ -1.1
RPAIN-215ENST00000575112 RPLP2P05387 115 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms