RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 KLHL31Q9H511 634 aa16.42■□□□□ 0.22
SMG6-214ENST00000573827 LRRC4CQ9HCJ2 640 aa16.42■□□□□ 0.22
SMG6-214ENST00000573827 CTNNAL1Q9UBT7 734 aa16.42■□□□□ 0.22
SMG6-214ENST00000573827 CHST10O43529 356 aa16.41■□□□□ 0.22
SMG6-214ENST00000573827 SEC24DO94855 1032 aaPredicted RBP16.41■□□□□ 0.22
SMG6-214ENST00000573827 GSTA2P09210 222 aa16.41■□□□□ 0.22
SMG6-214ENST00000573827 ZNF888P0CJ79 500 aaPredicted RBP16.41■□□□□ 0.22
SMG6-214ENST00000573827 GP1BBP13224 206 aa16.41■□□□□ 0.22
SMG6-214ENST00000573827 IL10P22301 178 aa16.41■□□□□ 0.22
SMG6-214ENST00000573827 GP5P40197 560 aa16.41■□□□□ 0.22
SMG6-214ENST00000573827 KCNC1P48547 511 aa16.41■□□□□ 0.22
SMG6-214ENST00000573827 PLTPP55058 493 aa16.41■□□□□ 0.22
SMG6-214ENST00000573827 OLR1P78380 273 aa16.41■□□□□ 0.22
SMG6-214ENST00000573827 TGFBIQ15582 683 aa16.41■□□□□ 0.22
SMG6-214ENST00000573827 OR4D1Q15615 310 aa16.41■□□□□ 0.22
SMG6-214ENST00000573827 H3F3CQ6NXT2 135 aa16.41■□□□□ 0.22
SMG6-214ENST00000573827 C3orf62Q6ZUJ4 267 aa16.41■□□□□ 0.22
SMG6-214ENST00000573827 TMPRSS11BQ86T26 416 aa16.41■□□□□ 0.22
SMG6-214ENST00000573827 GRHL3Q8TE85 626 aa16.41■□□□□ 0.22
SMG6-214ENST00000573827 PEX11GQ96HA9 241 aa16.41■□□□□ 0.22
SMG6-214ENST00000573827 CNDP1Q96KN2 507 aa16.41■□□□□ 0.22
SMG6-214ENST00000573827 TAAR6Q96RI8 345 aa16.41■□□□□ 0.22
SMG6-214ENST00000573827 RBCK1Q9BYM8 510 aa16.41■□□□□ 0.22
SMG6-214ENST00000573827 ERRFI1Q9UJM3 462 aaPredicted RBP16.41■□□□□ 0.22
SMG6-214ENST00000573827 KCNE2Q9Y6J6 123 aa16.41■□□□□ 0.22
SMG6-214ENST00000573827 ANKUB1A6NFN9 424 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 FAM155BO75949 473 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 AGFG2O95081 481 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 WDPCPO95876 746 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 FHP07954 510 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 EPORP19235 508 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 DLG1Q12959 904 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 USP10Q14694 798 aaKnown RBP16.4■□□□□ 0.22
SMG6-214ENST00000573827 KBTBD12Q3ZCT8 623 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 CDKL4Q5MAI5 379 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 VN1R5Q7Z5H4 357 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 ST6GALNAC3Q8NDV1 305 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 SSC4DQ8WTU2 575 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 FAR1Q8WVX9 515 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 METTL21AQ8WXB1 218 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 TBC1D20Q96BZ9 403 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 AIF1LQ9BQI0 150 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 ZDHHC18Q9NUE0 388 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 MAP10Q9P2G4 905 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 DYRK1BQ9Y463 629 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 ASB1Q9Y576 335 aa16.4■□□□□ 0.22
SMG6-214ENST00000573827 IGKV3D-11A0A0A0MRZ8 115 aa16.39■□□□□ 0.21
SMG6-214ENST00000573827 PABPN1LA6NDY0 278 aaKnown RBP16.39■□□□□ 0.21
SMG6-214ENST00000573827 MAGEB17A8MXT2 336 aa16.39■□□□□ 0.21
SMG6-214ENST00000573827 CDC123O75794 336 aaPredicted RBP16.39■□□□□ 0.21
SMG6-214ENST00000573827 SERPINA6P08185 405 aa16.39■□□□□ 0.21
SMG6-214ENST00000573827 CCDC166P0CW27 439 aa16.39■□□□□ 0.21
SMG6-214ENST00000573827 ICAM2P13598 275 aa16.39■□□□□ 0.21
SMG6-214ENST00000573827 MAGEA4P43358 317 aa16.39■□□□□ 0.21
SMG6-214ENST00000573827 AGTR2P50052 363 aa16.39■□□□□ 0.21
SMG6-214ENST00000573827 CAV1Q03135 178 aa16.39■□□□□ 0.21
SMG6-214ENST00000573827 RGS1Q08116 209 aa16.39■□□□□ 0.21
SMG6-214ENST00000573827 CDC16Q13042 620 aa16.39■□□□□ 0.21
SMG6-214ENST00000573827 ABRAXAS2Q15018 415 aa16.39■□□□□ 0.21
SMG6-214ENST00000573827 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.39■□□□□ 0.21
SMG6-214ENST00000573827 OR1N1Q8NGS0 311 aa16.39■□□□□ 0.21
SMG6-214ENST00000573827 CDKL2Q92772 493 aa16.39■□□□□ 0.21
SMG6-214ENST00000573827 WDR34Q96EX3 536 aa16.39■□□□□ 0.21
SMG6-214ENST00000573827 EGFL8Q99944 293 aa16.39■□□□□ 0.21
SMG6-214ENST00000573827 CLK4Q9HAZ1 481 aaKnown RBP16.39■□□□□ 0.21
SMG6-214ENST00000573827 UTP11Q9Y3A2 253 aaKnown RBP16.39■□□□□ 0.21
SMG6-214ENST00000573827 CLDN16Q9Y5I7 305 aa16.39■□□□□ 0.21
SMG6-214ENST00000573827 ABCA12Q86UK0 2595 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 TRAV17A0A0B4J275 112 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 ESYT3A0FGR9 886 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 HMX2A2RU54 273 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 NCF1BA6NI72 391 aaPredicted RBP16.38■□□□□ 0.21
SMG6-214ENST00000573827 NCF1CA8MVU1 366 aaPredicted RBP16.38■□□□□ 0.21
SMG6-214ENST00000573827 MAN1A2O60476 641 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 WFS1O76024 890 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 WDR47O94967 919 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 F10P00742 488 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 LDLRP01130 860 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 SERPIND1P05546 499 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 SLC35E2BP0CK96 405 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 C1GALT1C1LP0DN25 315 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 NCF1P14598 390 aaPredicted RBP16.38■□□□□ 0.21
SMG6-214ENST00000573827 GNAZP19086 355 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 CD22P20273 847 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 TDGF1P3P51864 188 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 RAB8AP61006 207 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 RAB10P61026 200 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 ATP6V0D1P61421 351 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 ARG2P78540 354 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 E2F2Q14209 437 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 EFTUD2Q15029 972 aaKnown RBP eCLIP16.38■□□□□ 0.21
SMG6-214ENST00000573827 SFT2D3Q587I9 215 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 FBXO48Q5FWF7 155 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 UBAP2Q5T6F2 1119 aaKnown RBP16.38■□□□□ 0.21
SMG6-214ENST00000573827 ADNP2Q6IQ32 1131 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 PDPRQ8NCN5 879 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 TRPV3Q8NET8 790 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 PRR7Q8TB68 274 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 M1APQ8TC57 530 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 KIAA1191Q96A73 305 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms