RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 KLHL31Q9H511 634 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 RIC8BQ9NVN3 520 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 DYRK1BQ9Y463 629 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 CLDN16Q9Y5I7 305 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 KCNE2Q9Y6J6 123 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 UTP20O75691 2785 aaKnown RBP16.32■□□□□ 0.2
SMG6-212ENST00000573153 POLEQ07864 2286 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 WIPF3A6NGB9 483 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 KIF2AO00139 706 aaPredicted RBP16.31■□□□□ 0.2
SMG6-212ENST00000573153 OR1F1O43749 312 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 FAM155BO75949 473 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 ALOX12P18054 663 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 IL10P22301 178 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 OLR1P78380 273 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 ZNF169Q14929 603 aaPredicted RBP16.31■□□□□ 0.2
SMG6-212ENST00000573153 EFTUD2Q15029 972 aaKnown RBP eCLIP16.31■□□□□ 0.2
SMG6-212ENST00000573153 OR4D1Q15615 310 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 EIF2S3LQ2VIR3 472 aaKnown RBP16.31■□□□□ 0.2
SMG6-212ENST00000573153 ADNP2Q6IQ32 1131 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 FRA10AC1Q70Z53 315 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 TMPRSS11BQ86T26 416 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 SIRT6Q8N6T7 355 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 PLPP5Q8NEB5 264 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 DNAJB14Q8TBM8 379 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 KIAA1191Q96A73 305 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 TAAR6Q96RI8 345 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 EGFL8Q99944 293 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 FUT8Q9BYC5 575 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 RBCK1Q9BYM8 510 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 CLK4Q9HAZ1 481 aaKnown RBP16.31■□□□□ 0.2
SMG6-212ENST00000573153 ANKHQ9HCJ1 492 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 PTGFRNQ9P2B2 879 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 SCN2AQ99250 2005 aa16.31■□□□□ 0.2
SMG6-212ENST00000573153 MAST4O15021 2626 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 HMX2A2RU54 273 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 ZNF888P0CJ79 500 aaPredicted RBP16.3■□□□□ 0.2
SMG6-212ENST00000573153 GNAZP19086 355 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 CD22P20273 847 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 TNFSF10P50591 281 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 E2F2Q14209 437 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 DEFB134Q4QY38 66 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 GLE1Q53GS7 698 aaKnown RBP16.3■□□□□ 0.2
SMG6-212ENST00000573153 FBXO48Q5FWF7 155 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 H3F3CQ6NXT2 135 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 RPUSD3Q6P087 351 aaKnown RBP16.3■□□□□ 0.2
SMG6-212ENST00000573153 CEP128Q6ZU80 1094 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 CPEB2Q7Z5Q1 589 aaKnown RBP16.3■□□□□ 0.2
SMG6-212ENST00000573153 CCDC91Q7Z6B0 441 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 CTAGE3PQ8IX95 158 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 PPM1NQ8N819 430 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 PDPRQ8NCN5 879 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 MNS1Q8NEH6 495 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 HAS2Q92819 552 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 PEX11GQ96HA9 241 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 SEC16BQ96JE7 1060 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 OR1F2PQ96R84 312 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 SLX1AQ9BQ83 275 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 AIF1LQ9BQI0 150 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 TUBB6Q9BUF5 446 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 CAPS2Q9BXY5 557 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 PITHD1Q9GZP4 211 aaPredicted RBP16.3■□□□□ 0.2
SMG6-212ENST00000573153 RNF32Q9H0A6 362 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 TSPYL1Q9H0U9 437 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 EHD1Q9H4M9 534 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 EPS8L2Q9H6S3 715 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 PLA2G3Q9NZ20 509 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 GPRC5BQ9NZH0 403 aa16.3■□□□□ 0.2
SMG6-212ENST00000573153 DOPEY1Q5JWR5 2465 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 ICE1Q9Y2F5 2266 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 IGKV3D-11A0A0A0MRZ8 115 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 CCDC189A1A4V9 331 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 CHST10O43529 356 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 MAN1A2O60476 641 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 SEC24DO94855 1032 aaPredicted RBP16.29■□□□□ 0.2
SMG6-212ENST00000573153 SLC35E2BP0CK96 405 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 CXCR2P25025 360 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 GSTM2P28161 218 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 CRABP2P29373 138 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 TDGF1P3P51864 188 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 SKP1P63208 163 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 TLR1Q15399 786 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 MINDY4Q4G0A6 757 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 PLAG1Q6DJT9 500 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 SULT1C3Q6IMI6 304 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 CMC1Q7Z7K0 106 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 GPSM1Q86YR5 675 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMG6-212ENST00000573153 TRPV3Q8NET8 790 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 GRHL3Q8TE85 626 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 ESAMQ96AP7 390 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 NT5DC2Q9H857 520 aa16.29■□□□□ 0.2
SMG6-212ENST00000573153 CNOT10Q9H9A5 744 aaKnown RBP16.29■□□□□ 0.2
SMG6-212ENST00000573153 DMGDHQ9UI17 866 aaKnown RBP16.29■□□□□ 0.2
SMG6-212ENST00000573153 ERRFI1Q9UJM3 462 aaPredicted RBP16.29■□□□□ 0.2
SMG6-212ENST00000573153 PTBP2Q9UKA9 531 aaKnown RBP16.29■□□□□ 0.2
SMG6-212ENST00000573153 COPG1Q9Y678 874 aaKnown RBP16.29■□□□□ 0.2
SMG6-212ENST00000573153 MAGEB17A8MXT2 336 aa16.28■□□□□ 0.2
SMG6-212ENST00000573153 CDC123O75794 336 aaPredicted RBP16.28■□□□□ 0.2
SMG6-212ENST00000573153 WDR47O94967 919 aa16.28■□□□□ 0.2
SMG6-212ENST00000573153 WDPCPO95876 746 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms