RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 CACNG1Q06432 222 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 TNK2Q07912 1038 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 SLC13A2Q13183 592 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 MTM1Q13496 603 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 RAB32Q13637 225 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 DPYSL3Q14195 570 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 INPP5AQ14642 412 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 PRKD1Q15139 912 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 SF3B4Q15427 424 aaKnown RBP eCLIP3.43□□□□□ -1.86
SMG6-208ENST00000570874 TESK1Q15569 626 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 SKIDA1Q1XH10 827 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 LRRC26Q2I0M4 334 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 ZXDCQ2QGD7 858 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 NRN1LQ496H8 165 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 CDONQ4KMG0 1287 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 LACTB2Q53H82 288 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 TEX44Q53QW1 395 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 TMEM41BQ5BJD5 291 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 TFDP3Q5H9I0 405 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 EOGTQ5NDL2 527 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 HP1BP3Q5SSJ5 553 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 PDZK1Q5T2W1 519 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 MLIPQ5VWP3 458 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 LRRC66Q68CR7 880 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 SLC25A25Q6KCM7 469 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 CDC73Q6P1J9 531 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 TMEM71Q6P5X7 295 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 PRSS55Q6UWB4 352 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 SLC39A5Q6ZMH5 540 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 WDR88Q6ZMY6 472 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 RTL4Q6ZR62 310 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 KCTD8Q6ZWB6 473 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 TRILQ7L0X0 811 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 PARS2Q7L3T8 475 aaKnown RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 NDUFAF7Q7L592 441 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 LINC00523Q86TU6 105 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 LONP2Q86WA8 852 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 SERPINA12Q8IW75 414 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 ARHGAP12Q8IWW6 846 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 TIGD4Q8IY51 512 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 CCDC36Q8IYA8 594 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 LRRC56Q8IYG6 542 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 RCOR2Q8IZ40 523 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 ABI1Q8IZP0 508 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 CENPLQ8N0S6 344 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 FAM58AQ8N1B3 248 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 ARHGAP18Q8N392 663 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 PQLC3Q8N755 202 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 RASGEF1AQ8N9B8 481 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 FADS6Q8N9I5 356 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 TMEM116Q8NCL8 245 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 MCUQ8NE86 351 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 C17orf47Q8NEP4 570 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 OR7G1Q8NGA0 311 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 EXD1Q8NHP7 514 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 SUN3Q8TAQ9 357 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 ACTL9Q8TC94 416 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 FBXO25Q8TCJ0 367 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 ING5Q8WYH8 240 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 ERLEC1Q96DZ1 483 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 ELP4Q96EB1 424 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 OXNAD1Q96HP4 312 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 REXO5Q96IC2 774 aaKnown RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 ZFYVE19Q96K21 471 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 MEGF10Q96KG7 1140 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 FCRL2Q96LA5 508 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 PGLYRP2Q96PD5 576 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 KLHL5Q96PQ7 755 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 CCNL2Q96S94 520 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 SPSB2Q99619 263 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 C17orf80Q9BSJ5 609 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 WACQ9BTA9 647 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 TMEM121Q9BTD3 319 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 C11orf84Q9BUA3 381 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 ADI1Q9BV57 179 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 VN1R3Q9BXE9 311 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 NLNQ9BYT8 704 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 DPH1Q9BZG8 443 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 P2RY12Q9H244 342 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 CHST8Q9H2A9 424 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 CRISPLD1Q9H336 500 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 OSGEPL1Q9H4B0 414 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 WDCPQ9H6R7 721 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 ZNF552Q9H707 407 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 SEMA4BQ9NPR2 832 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 ZNF275Q9NSD4 429 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 RIC8BQ9NVN3 520 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 MTMR10Q9NXD2 777 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 DTLQ9NZJ0 730 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 HCN3Q9P1Z3 774 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 APOBEC3BQ9UH17 382 aaKnown RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 PCYOX1Q9UHG3 505 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 RAPGEFL1Q9UHV5 662 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 SCOCQ9UIL1 159 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 CDH22Q9UJ99 828 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 ENPP5Q9UJA9 477 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 KCND3Q9UK17 655 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 NUDT5Q9UKK9 219 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 PSMD13Q9UNM6 376 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms