RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 Q8NA96 180 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 OR5T3Q8NGG3 340 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 RHEBL1Q8TAI7 183 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 UHMK1Q8TAS1 419 aaKnown RBP12.31□□□□□ -0.44
CNOT1-220ENST00000569916 ISL2Q96A47 359 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 WDR34Q96EX3 536 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 PEX11GQ96HA9 241 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 CAPS2Q9BXY5 557 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 MFRPQ9BY79 579 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 RBCK1Q9BYM8 510 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 CD244Q9BZW8 370 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 LHPPQ9H008 270 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 EHD1Q9H4M9 534 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 KLHL31Q9H511 634 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 NT5DC2Q9H857 520 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 ZBTB20Q9HC78 741 aaPredicted RBP12.31□□□□□ -0.44
CNOT1-220ENST00000569916 CCDC189A1A4V9 331 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 OR2W5A6NFC9 320 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 CCNT2O60583 730 aaKnown RBP12.3□□□□□ -0.44
CNOT1-220ENST00000569916 DNAJB6O75190 326 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 H2AFYO75367 372 aaKnown RBP12.3□□□□□ -0.44
CNOT1-220ENST00000569916 KLHL2O95198 593 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 SERPINA6P08185 405 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 INHBAP08476 426 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 RHOXF2BP0C7M4 288 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 C8orf89P0DMQ9 161 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 SMIM10L1P0DMW3 83 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 CD22P20273 847 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 GSTM2P28161 218 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 TYK2P29597 1187 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 HNF4AP41235 474 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 GLRBP48167 497 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 AGTR2P50052 363 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 MLLT10P55197 1068 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 RAB8AP61006 207 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 SKP1P63208 163 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 OLR1P78380 273 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 DOC2AQ14183 400 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 E2F2Q14209 437 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 FAM83EQ2M2I3 478 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 MINDY4Q4G0A6 757 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 TOR1AIP1Q5JTV8 583 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 MFSD4BQ5TF39 518 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 ADNP2Q6IQ32 1131 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 NIPAL1Q6NVV3 410 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 LANCL3Q6ZV70 420 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 VN1R5Q7Z5H4 357 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 IFT20Q8IY31 132 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 KRT78Q8N1N4 520 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 TTLQ8NG68 377 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 DCAKDQ8WVC6 231 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 PNPLA2Q96AD5 504 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 MIB2Q96AX9 1013 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 PTCD3Q96EY7 689 aaKnown RBP12.3□□□□□ -0.44
CNOT1-220ENST00000569916 SMIM10Q96HG1 83 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 THOC3Q96J01 351 aaKnown RBP12.3□□□□□ -0.44
CNOT1-220ENST00000569916 GPR78Q96P69 363 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 OR1F2PQ96R84 312 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 RHOXF2Q9BQY4 288 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 PITHD1Q9GZP4 211 aaPredicted RBP12.3□□□□□ -0.44
CNOT1-220ENST00000569916 ZNF700Q9H0M5 742 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 LANCL2Q9NS86 450 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 RIC8BQ9NVN3 520 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 LUZP4Q9P127 313 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 ZNF180Q9UJW8 692 aa12.3□□□□□ -0.44
CNOT1-220ENST00000569916 A0A087WUV0 522 aaPredicted RBP12.29□□□□□ -0.44
CNOT1-220ENST00000569916 URADA6NGE7 173 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 SYCE1LA8MT33 242 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 POC1B-GALNT4F8VUJ3 575 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 CHST10O43529 356 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 CDC123O75794 336 aaPredicted RBP12.29□□□□□ -0.44
CNOT1-220ENST00000569916 TBX6O95947 436 aaPredicted RBP12.29□□□□□ -0.44
CNOT1-220ENST00000569916 CELA2AP08217 269 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 ABHD2P08910 425 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 PRR35P0CG20 571 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 IL10P22301 178 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 HNRNPH1P31943 449 aaKnown RBP12.29□□□□□ -0.44
CNOT1-220ENST00000569916 MSH2P43246 934 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 SERPINB9P50453 376 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 STXBP1P61764 594 aaKnown RBP12.29□□□□□ -0.44
CNOT1-220ENST00000569916 RHAGQ02094 409 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 SETDB1Q15047 1291 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 ACAP2Q15057 778 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 IGFBP7Q16270 282 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 XKR6Q5GH73 641 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 TECRLQ5HYJ1 363 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 AGAP7PQ5VUJ5 663 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 IRAK1BP1Q5VVH5 260 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 IGFL2Q6UWQ7 119 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 TAOK1Q7L7X3 1001 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 KBTBD2Q8IY47 623 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 PLD6Q8N2A8 252 aaKnown RBP12.29□□□□□ -0.44
CNOT1-220ENST00000569916 AMER2Q8N7J2 671 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 METTL21AQ8WXB1 218 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 TM9SF4Q92544 642 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 GAL3ST3Q96A11 431 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 SEC16BQ96JE7 1060 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 IMMP1LQ96LU5 166 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 AGAP4Q96P64 663 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 EFCAB11Q9BUY7 163 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms