RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 TRUB1Q8WWH5 349 aaKnown RBP7.55□□□□□ -1.2
LINC00559-201ENST00000569476 NEURL3Q96EH8 262 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 SCARF2Q96GP6 870 aaPredicted RBP7.55□□□□□ -1.2
LINC00559-201ENST00000569476 DHRS1Q96LJ7 313 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 SIGLEC11Q96RL6 698 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 ATG10Q9H0Y0 220 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 RSPH9Q9H1X1 276 aaPredicted RBP7.55□□□□□ -1.2
LINC00559-201ENST00000569476 CLDN24A6NM45 220 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 POP7O75817 140 aaKnown RBP7.55□□□□□ -1.2
LINC00559-201ENST00000569476 GABARAPO95166 117 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 LAMP1P11279 417 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 PCMT1P22061 227 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 ACVR2AP27037 513 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 NEK2P51955 445 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 KCNC4Q03721 635 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 CD47Q08722 323 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 GTDC1Q4AE62 458 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 COMMD6Q7Z4G1 85 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 C11orf96Q7Z7L8 435 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 SLC9B2Q86UD5 537 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.55□□□□□ -1.2
LINC00559-201ENST00000569476 OR7A2PQ8NGA2 310 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 GIPC3Q8TF64 312 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 BHMTQ93088 406 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 MYDGFQ969H8 173 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 NEIL2Q969S2 332 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 MTFMTQ96DP5 389 aaKnown RBP7.55□□□□□ -1.2
LINC00559-201ENST00000569476 MED8Q96G25 268 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 DACH2Q96NX9 599 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 MS4A8Q9BY19 250 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 SIAEQ9HAT2 523 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 TBC1D23Q9NUY8 699 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 PAK1IP1Q9NWT1 392 aaPredicted RBP7.55□□□□□ -1.2
LINC00559-201ENST00000569476 OR2AG2A6NM03 316 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 KPNA3O00505 521 aaPredicted RBP7.55□□□□□ -1.2
LINC00559-201ENST00000569476 CAPN5O15484 640 aaPredicted RBP7.55□□□□□ -1.2
LINC00559-201ENST00000569476 PIPP12273 146 aaPredicted RBP7.55□□□□□ -1.2
LINC00559-201ENST00000569476 RHCEP18577 417 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 NDUFS1P28331 727 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 LIMS1P48059 325 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 TUBA1BP68363 451 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 HEPACAMQ14CZ8 416 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 MAD2L1BPQ15013 274 aaPredicted RBP7.55□□□□□ -1.2
LINC00559-201ENST00000569476 TUBA3EQ6PEY2 450 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 TUBA1AQ71U36 451 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 OTOP2Q7RTS6 562 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 ZNF605Q86T29 641 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 SYTL1Q8IYJ3 562 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 GJD3Q8N144 294 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 TBCDQ9BTW9 1192 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 SPATA5L1Q9BVQ7 753 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 WDR12Q9GZL7 423 aaKnown RBP7.55□□□□□ -1.2
LINC00559-201ENST00000569476 KIF17Q9P2E2 1029 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 KCND3Q9UK17 655 aa7.55□□□□□ -1.2
LINC00559-201ENST00000569476 TRBC2A0A5B9 178 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 SH3PXD2BA1X283 911 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 SLITRK5O94991 958 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 GGT2P36268 569 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 RELAQ04206 551 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 SCARB2Q14108 478 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 ZNF234Q14588 700 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 NDUFA9Q16795 377 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 AAK1Q2M2I8 961 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 LRRC23Q53EV4 343 aaPredicted RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 OTUD3Q5T2D3 398 aaPredicted RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 PIP5KL1Q5T9C9 394 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 KHDRBS2Q5VWX1 349 aaKnown RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 TMIGD1Q6UXZ0 262 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 TMPRSS11BQ86T26 416 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 PHACTR4Q8IZ21 702 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 FAM86B1Q8N7N1 296 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 TTC29Q8NA56 475 aaPredicted RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 SRFBP1Q8NEF9 429 aaKnown RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 OR2L8Q8NGY9 312 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 SH3KBP1Q96B97 665 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 ELSPBP1Q96BH3 223 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 NLNQ9BYT8 704 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 POLR2J2Q9GZM3 115 aaKnown RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 ROGDIQ9GZN7 287 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 TWSG1Q9GZX9 223 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 POLR2J3Q9H1A7 115 aaKnown RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 OR2AG1Q9H205 316 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 PHPT1Q9NRX4 125 aaPredicted RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 C1GALT1Q9NS00 363 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 KRT84Q9NSB2 600 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 SLC6A13Q9NSD5 602 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 CNOT2Q9NZN8 540 aaKnown RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 NDOR1Q9UHB4 597 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 PCDHGA8Q9Y5G5 932 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 GMPPBQ9Y5P6 360 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 A8MX80 341 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 RFPL2O75678 378 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 APODP05090 189 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 MYCLP1P12525 358 aaPredicted RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 AHRP35869 848 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 KRT20P35900 424 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 DAPP51397 102 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 MVDP53602 400 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 SLC35A2P78381 396 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 ALDH6A1Q02252 535 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms