RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 ZNF385CQ66K41 422 aaPredicted RBP12.41□□□□□ -0.42
CNOT1-217ENST00000569263 NIPAL1Q6NVV3 410 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 TRIM40Q6P9F5 258 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 ZCCHC23Q6ZST2 131 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 VN1R5Q7Z5H4 357 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 SPACA3Q8IXA5 215 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 DTWD1Q8N5C7 304 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 CDYL2Q8N8U2 506 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 HUS1BQ8NHY5 278 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 AGAP11Q8TF27 550 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 ZNF473Q8WTR7 871 aaKnown RBP12.41□□□□□ -0.42
CNOT1-217ENST00000569263 GAL3ST3Q96A11 431 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 MMABQ96EY8 250 aaPredicted RBP12.41□□□□□ -0.42
CNOT1-217ENST00000569263 FAR2Q96K12 515 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 CNDP1Q96KN2 507 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 CNTNAP3BQ96NU0 1288 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 FRG2BQ96QU4 278 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 MTERF1Q99551 399 aaKnown RBP12.41□□□□□ -0.42
CNOT1-217ENST00000569263 CENPKQ9BS16 269 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 TRMOQ9BU70 441 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 EFHD1Q9BUP0 239 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 MS4A8Q9BY19 250 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 CNTNAP3Q9BZ76 1288 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 SLC29A3Q9BZD2 475 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 REXO4Q9GZR2 422 aaKnown RBP12.41□□□□□ -0.42
CNOT1-217ENST00000569263 ZNF304Q9HCX3 659 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 DMRT3Q9NQL9 472 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 ZNF446Q9NWS9 450 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 SCN3AQ9NY46 2000 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 SNX6Q9UNH7 406 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 SLC22A7Q9Y694 548 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 MAU2Q9Y6X3 613 aa12.41□□□□□ -0.42
CNOT1-217ENST00000569263 FRYQ5TBA9 3013 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 A0A088AWK7 358 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 A0A1B0GTL3 188 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 C21orf140B9A014 251 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 ERI3O43414 337 aaKnown RBP12.4□□□□□ -0.42
CNOT1-217ENST00000569263 FOXS1O43638 330 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 NPHS1O60500 1241 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 SH3BGRLO75368 114 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 KLHL18O94889 574 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 NSA2O95478 260 aaKnown RBP12.4□□□□□ -0.42
CNOT1-217ENST00000569263 ESRRBO95718 433 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 KRT6AP02538 564 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 KRT6BP04259 564 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 CAPN1P07384 714 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 DHRS4L1P0CG22 281 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 LIFP15018 202 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 ZNF10P21506 573 aaPredicted RBP12.4□□□□□ -0.42
CNOT1-217ENST00000569263 HNRNPH1P31943 449 aaKnown RBP12.4□□□□□ -0.42
CNOT1-217ENST00000569263 CCR10P46092 362 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 KRT6CP48668 564 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 RAP1GDS1P52306 607 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 SLC18A1P54219 525 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 RAB8AP61006 207 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 RPS13P62277 151 aaKnown RBP12.4□□□□□ -0.42
CNOT1-217ENST00000569263 HYAL2Q12891 473 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 RCN2Q14257 317 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 NCF4Q15080 339 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 CHI3L2Q15782 390 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 DEFB134Q4QY38 66 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 SGO1Q5FBB7 561 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 MLIPQ5VWP3 458 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 FAM198BQ6UWH4 519 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 ZNF517Q6ZMY9 492 aaPredicted RBP12.4□□□□□ -0.42
CNOT1-217ENST00000569263 CHSY3Q70JA7 882 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 ARHGEF39Q8N4T4 335 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 OR2L5Q8NG80 312 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 OR9A4Q8NGU2 314 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 WDR20Q8TBZ3 569 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 METTL6Q8TCB7 284 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 UTP15Q8TED0 518 aaKnown RBP12.4□□□□□ -0.42
CNOT1-217ENST00000569263 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.4□□□□□ -0.42
CNOT1-217ENST00000569263 SELENOMQ8WWX9 145 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 FKBP10Q96AY3 582 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 MTFMTQ96DP5 389 aaKnown RBP12.4□□□□□ -0.42
CNOT1-217ENST00000569263 CMTM7Q96FZ5 175 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 YIPF2Q9BWQ6 316 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 SHCBP1LQ9BZQ2 653 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 KLHL31Q9H511 634 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 AKIRIN1Q9H9L7 192 aaPredicted RBP12.4□□□□□ -0.42
CNOT1-217ENST00000569263 COPS7BQ9H9Q2 264 aaPredicted RBP12.4□□□□□ -0.42
CNOT1-217ENST00000569263 EML4Q9HC35 981 aaKnown RBP12.4□□□□□ -0.42
CNOT1-217ENST00000569263 KCND3Q9UK17 655 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 PADI2Q9Y2J8 665 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 NAALAD2Q9Y3Q0 740 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 TSC22D4Q9Y3Q8 395 aa12.4□□□□□ -0.42
CNOT1-217ENST00000569263 IGF2RP11717 2491 aa12.39□□□□□ -0.43
CNOT1-217ENST00000569263 AHCTF1Q8WYP5 2266 aa12.39□□□□□ -0.43
CNOT1-217ENST00000569263 LRIT2A6NDA9 550 aa12.39□□□□□ -0.43
CNOT1-217ENST00000569263 ZNF860A6NHJ4 632 aa12.39□□□□□ -0.43
CNOT1-217ENST00000569263 MAGEB17A8MXT2 336 aa12.39□□□□□ -0.43
CNOT1-217ENST00000569263 H0YIG0 161 aa12.39□□□□□ -0.43
CNOT1-217ENST00000569263 SGK494L7N484 410 aa12.39□□□□□ -0.43
CNOT1-217ENST00000569263 TAF4O00268 1085 aa12.39□□□□□ -0.43
CNOT1-217ENST00000569263 RDH16O75452 317 aa12.39□□□□□ -0.43
CNOT1-217ENST00000569263 TGFB1P01137 390 aa12.39□□□□□ -0.43
CNOT1-217ENST00000569263 CD63P08962 238 aa12.39□□□□□ -0.43
CNOT1-217ENST00000569263 RAB40ALP0C0E4 278 aa12.39□□□□□ -0.43
CNOT1-217ENST00000569263 ITGAXP20702 1163 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms