RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 RIPOR1Q6ZS17 1223 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 Q6ZS92 163 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 SHISA6Q6ZSJ9 500 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 FRA10AC1Q70Z53 315 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 TMPRSS11BQ86T26 416 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 LAS2Q8IYD9 372 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 PLD6Q8N2A8 252 aaKnown RBP7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 TEX19Q8NA77 164 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 Q8NA96 180 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 CLEC18CQ8NCF0 446 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.73□□□□□ -1.173e-6■■■■■ 50.8
HDGFL3-205ENST00000568129 PNPLA2Q96AD5 504 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 MIB2Q96AX9 1013 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 ALKBH8Q96BT7 664 aaKnown RBP7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 PTCD3Q96EY7 689 aaKnown RBP7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 TSNARE1Q96NA8 513 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 QRFPRQ96P65 431 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 WDR77Q9BQA1 342 aaPredicted RBP7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 MESP1Q9BRJ9 268 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 NPLQ9BXD5 320 aaPredicted RBP7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 UNKQ9C0B0 810 aaKnown RBP7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 LHPPQ9H008 270 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 KLHL31Q9H511 634 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 ALG9Q9H6U8 611 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 SNX15Q9NRS6 342 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 PSD3Q9NYI0 1048 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 RNF112Q9ULX5 631 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 NFU1Q9UMS0 254 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 NAALAD2Q9Y3Q0 740 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 ASB1Q9Y576 335 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 MYO18BQ8IUG5 2567 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 HIVEP3Q5T1R4 2406 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 UBR5O95071 2799 aaPredicted RBP7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 TENM4Q6N022 2769 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 GTF3C1Q12789 2109 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 EML6Q6ZMW3 1958 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 RELNP78509 3460 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 RP1L1Q8IWN7 2480 aaPredicted RBP7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 PRRC2CQ9Y520 2896 aaKnown RBP7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 IGKV3D-11A0A0A0MRZ8 115 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 NCF1BA6NI72 391 aaPredicted RBP7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 NCF1CA8MVU1 366 aaPredicted RBP7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 MAGEB17A8MXT2 336 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 C4orf51C9J302 202 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 K7EPI3 171 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 UBXN8O00124 270 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 MASP2O00187 686 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 CLGNO14967 610 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 RIPK2O43353 540 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 CHST10O43529 356 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 UGDHO60701 494 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 DNAJB6O75190 326 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 WISP1O95388 367 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 ACSL3O95573 720 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 SERPINA7P05543 415 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 PRR35P0CG20 571 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 ZNF888P0CJ79 500 aaPredicted RBP7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 ICAM2P13598 275 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 NCF1P14598 390 aaPredicted RBP7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 ACPPP15309 386 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 IL1RNP18510 177 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 TYK2P29597 1187 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 SOX11P35716 441 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 XCR1P46094 333 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 AGTR2P50052 363 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 ARFIP1P53367 373 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 ALDH18A1P54886 795 aaKnown RBP7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 SKP1P63208 163 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 MAT1AQ00266 395 aaKnown RBP7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 IRF9Q00978 393 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 BMPR2Q13873 1038 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 DOC2AQ14183 400 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 PDK4Q16654 411 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 PLEKHN1Q494U1 663 aaPredicted RBP7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 NADK2Q4G0N4 442 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 TECRLQ5HYJ1 363 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 QSOX2Q6ZRP7 698 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 RAPH1Q70E73 1250 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 ABHD13Q7L211 337 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 LCA5Q86VQ0 697 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 KRT78Q8N1N4 520 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 KCTD4Q8WVF5 259 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 GAL3ST3Q96A11 431 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 TBC1D20Q96BZ9 403 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 MS4A6EQ96DS6 147 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 PAFAH2Q99487 392 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 TUBB6Q9BUF5 446 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 EFCAB11Q9BUY7 163 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 C1QTNF3Q9BXJ4 246 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 ZBTB20Q9HC78 741 aaPredicted RBP7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 WWOXQ9NZC7 414 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 CD274Q9NZQ7 290 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 MKL2Q9ULH7 1088 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 TMCO1Q9UM00 188 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 PPT2Q9UMR5 302 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 G3BP2Q9UN86 482 aaKnown RBP7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 PPIEQ9UNP9 301 aaKnown RBP7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 CLDN16Q9Y5I7 305 aa7.72□□□□□ -1.17
HDGFL3-205ENST00000568129 SVILO95425 2214 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms