RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 CNOT10Q9H9A5 744 aaKnown RBP4.52□□□□□ -1.69
CLK3-219ENST00000567805 PELI2Q9HAT8 420 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 SAYSD1Q9NPB0 183 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 SMYD2Q9NRG4 433 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 ASF1BQ9NVP2 202 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 GRHL1Q9NZI5 618 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 HCN3Q9P1Z3 774 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 PTGFRNQ9P2B2 879 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 CTNNAL1Q9UBT7 734 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 TEKT2Q9UIF3 430 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 ZFP69BQ9UJL9 534 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 IKZF3Q9UKT9 509 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 SLC22A14Q9Y267 594 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 NAALAD2Q9Y3Q0 740 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 DYRK1BQ9Y463 629 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 CSAG2Q9Y5P2 127 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 KCNE2Q9Y6J6 123 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 PTPN13Q12923 2485 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 CELSR2Q9HCU4 2923 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 TRAV17A0A0B4J275 112 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 BLACEA4D250 179 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 ANKUB1A6NFN9 424 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 ZNF860A6NHJ4 632 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 FAM159BA6NKW6 160 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 MAGEB17A8MXT2 336 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 GALR3O60755 368 aaPredicted RBP4.51□□□□□ -1.69
CLK3-219ENST00000567805 SEMA7AO75326 666 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 H2AFYO75367 372 aaKnown RBP4.51□□□□□ -1.69
CLK3-219ENST00000567805 JRKO75564 520 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 PIAS1O75925 651 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 SEC24DO94855 1032 aaPredicted RBP4.51□□□□□ -1.69
CLK3-219ENST00000567805 WDR47O94967 919 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 DDAH2O95865 285 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 C1QAP02745 245 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 SERPIND1P05546 499 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 FHP07954 510 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 SERPINA6P08185 405 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 CELA2AP08217 269 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 ZNF888P0CJ79 500 aaPredicted RBP4.51□□□□□ -1.69
CLK3-219ENST00000567805 CCDC166P0CW27 439 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 SMIM10L1P0DMW3 83 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 MYBL2P10244 700 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 ITGAMP11215 1152 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 GP1BBP13224 206 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 EDN3P14138 238 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 STMN1P16949 149 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 ALOX12P18054 663 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 JAK1P23458 1154 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 HPDP32754 393 aaPredicted RBP4.51□□□□□ -1.69
CLK3-219ENST00000567805 STX2P32856 288 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 SPRP35270 261 aaPredicted RBP4.51□□□□□ -1.69
CLK3-219ENST00000567805 GGT5P36269 586 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 GP5P40197 560 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 MAGEA4P43358 317 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 SLC6A12P48065 614 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 TNFSF10P50591 281 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 PLTPP55058 493 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 GPX6P59796 221 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 RAB10P61026 200 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 ATP6V0D1P61421 351 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 RHAGQ02094 409 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 CKAP4Q07065 602 aaKnown RBP4.51□□□□□ -1.69
CLK3-219ENST00000567805 NAB1Q13506 487 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 ELOAQ14241 798 aaKnown RBP4.51□□□□□ -1.69
CLK3-219ENST00000567805 USP10Q14694 798 aaKnown RBP4.51□□□□□ -1.69
CLK3-219ENST00000567805 ABRAXAS2Q15018 415 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 NSDHLQ15738 373 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 ZKSCAN8Q15776 578 aaPredicted RBP4.51□□□□□ -1.69
CLK3-219ENST00000567805 EXT1Q16394 746 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 EIF2S3LQ2VIR3 472 aaKnown RBP4.51□□□□□ -1.69
CLK3-219ENST00000567805 BTBD16Q32M84 506 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 KBTBD12Q3ZCT8 623 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 DEFB134Q4QY38 66 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 GRTP1Q5TC63 336 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 ABHD17BQ5VST6 288 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 H3F3CQ6NXT2 135 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 FAM180AQ6UWF9 173 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 QSOX2Q6ZRP7 698 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 LANCL3Q6ZV70 420 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 ANKRD37Q7Z713 158 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 GPSM1Q86YR5 675 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 CTAGE3PQ8IX95 158 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 C17orf53Q8N3J3 647 aaPredicted RBP4.51□□□□□ -1.69
CLK3-219ENST00000567805 SIRT6Q8N6T7 355 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 ANKRD53Q8N9V6 530 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 PDPRQ8NCN5 879 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 ST6GALNAC3Q8NDV1 305 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 PLPP5Q8NEB5 264 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 CATSPER1Q8NEC5 780 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 OR5T3Q8NGG3 340 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 M1APQ8TC57 530 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 FBXO25Q8TCJ0 367 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 GRHL3Q8TE85 626 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 UTP15Q8TED0 518 aaKnown RBP4.51□□□□□ -1.69
CLK3-219ENST00000567805 SSC4DQ8WTU2 575 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 FAR1Q8WVX9 515 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 TBC1D20Q96BZ9 403 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 RHBDF1Q96CC6 855 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 MOCOSQ96EN8 888 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 PEX11GQ96HA9 241 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms