RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 BEND5Q7L4P6 421 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 SPRED1Q7Z699 444 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 ZNF655Q8N720 491 aaPredicted RBP11.32□□□□□ -0.6
SIN3A-208ENST00000567289 C9orf43Q8TAL5 461 aaPredicted RBP11.32□□□□□ -0.6
SIN3A-208ENST00000567289 AKAP1Q92667 903 aaKnown RBP eCLIP11.32□□□□□ -0.6
SIN3A-208ENST00000567289 CRELD1Q96HD1 420 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 ZNF583Q96ND8 569 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 ATOH8Q96SQ7 321 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 TSSK6Q9BXA6 273 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 NFKBIZQ9BYH8 718 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 KRCC1Q9NPI7 259 aaPredicted RBP11.32□□□□□ -0.6
SIN3A-208ENST00000567289 CFAP97Q9P2B7 532 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 HCN2Q9UL51 889 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 NCKAP1Q9Y2A7 1128 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 DLGAP4Q9Y2H0 992 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 GPR52Q9Y2T5 361 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 MEIOCA2RUB1 952 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 NEDD8-MDP1E9PL57 170 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 GMFGO60234 142 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 CRYZL1O95825 349 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 PTTG1O95997 202 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 B3GALT4O96024 378 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 HLA-DQA2P01906 255 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 SBK3P0C264 359 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 EBLN1P0CF75 366 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 TACR1P25103 407 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 MAP2K3P46734 347 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 AQP6Q13520 282 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 SLC9A5Q14940 896 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 MAD2L1BPQ15013 274 aaPredicted RBP11.32□□□□□ -0.6
SIN3A-208ENST00000567289 AGAP6Q5VW22 663 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 KCTD11Q693B1 232 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 MAMDC4Q6UXC1 1216 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 LINGO2Q7L985 606 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 ADGRD2Q7Z7M1 963 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 NPAS3Q8IXF0 933 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 PELI3Q8N2H9 469 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 PIAS4Q8N2W9 510 aaPredicted RBP11.32□□□□□ -0.6
SIN3A-208ENST00000567289 C12orf66Q96MD2 445 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 AGAP4Q96P64 663 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 AMBRA1Q9C0C7 1298 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 TREX1Q9NSU2 369 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 NLE1Q9NVX2 485 aaPredicted RBP11.32□□□□□ -0.6
SIN3A-208ENST00000567289 FBXW2Q9UKT8 454 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 A0A1W2PRG6 482 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 DLGAP1O14490 977 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 PRAMEF11O60813 436 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 HRH2P25021 359 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 HTR7P34969 479 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 CASP3P42574 277 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 BDKRB1P46663 353 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 GABARAPL2P60520 117 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 SCAPQ12770 1279 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 MAP2K5Q13163 448 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 MTA1Q13330 715 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 CTU2Q2VPK5 515 aaKnown RBP11.32□□□□□ -0.6
SIN3A-208ENST00000567289 PKDCCQ504Y2 493 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 ATG9BQ674R7 924 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 CEP68Q76N32 757 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 ADGRG2Q8IZP9 1017 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 C3orf58Q8NDZ4 430 aa11.32□□□□□ -0.6
SIN3A-208ENST00000567289 UPF1Q92900 1129 aaKnown RBP eCLIP11.32□□□□□ -0.6
SIN3A-208ENST00000567289 MRM3Q9HC36 420 aaKnown RBP11.32□□□□□ -0.6
SIN3A-208ENST00000567289 IMP3Q9NV31 184 aaKnown RBP11.32□□□□□ -0.6
SIN3A-208ENST00000567289 ZNF282Q9UDV7 671 aaPredicted RBP11.32□□□□□ -0.6
SIN3A-208ENST00000567289 ZBTB42B2RXF5 422 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 NFKBIEO00221 500 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 WWP2O00308 870 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 MPZL2O60487 215 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 SEC14L2O76054 403 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 H1F0P07305 194 aaKnown RBP11.31□□□□□ -0.6
SIN3A-208ENST00000567289 NUDT7P0C024 238 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 TNFSF8P32971 234 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 FNTBP49356 437 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 ARF5P84085 180 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 ZNF280BQ86YH2 543 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 AP2M1Q96CW1 435 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 ENAMQ9NRM1 1142 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 EXTL2Q9UBQ6 330 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 PFDN2Q9UHV9 154 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 ZFR2Q9UPR6 939 aaKnown RBP11.31□□□□□ -0.6
SIN3A-208ENST00000567289 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.31□□□□□ -0.6
SIN3A-208ENST00000567289 CLCA1A8K7I4 914 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 PRKACBP22694 351 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 ARNTP27540 789 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 GALNT1Q10472 559 aaPredicted RBP11.31□□□□□ -0.6
SIN3A-208ENST00000567289 GINS1Q14691 196 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 PNCKQ6P2M8 343 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 Q6ZSR9 355 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 PAQR9Q6ZVX9 377 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 C17orf64Q86WR6 236 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 CELF5Q8N6W0 485 aaKnown RBP11.31□□□□□ -0.6
SIN3A-208ENST00000567289 GOLM1Q8NBJ4 401 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 ASB12Q8WXK4 309 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 GTF2H4Q92759 462 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 UBXN10Q96LJ8 280 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 ABCG5Q9H222 651 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 KLHL31Q9H511 634 aa11.31□□□□□ -0.6
SIN3A-208ENST00000567289 DCAF13Q9NV06 445 aaKnown RBP11.31□□□□□ -0.6
SIN3A-208ENST00000567289 TAS2R7Q9NYW3 318 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms