RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 TOR1AIP1Q5JTV8 583 aa14.1□□□□□ -0.15
SPG7-213ENST00000566221 KHDRBS2Q5VWX1 349 aaKnown RBP14.1□□□□□ -0.15
SPG7-213ENST00000566221 CHSY3Q70JA7 882 aa14.1□□□□□ -0.15
SPG7-213ENST00000566221 TRIM46Q7Z4K8 759 aa14.1□□□□□ -0.15
SPG7-213ENST00000566221 WDR75Q8IWA0 830 aaKnown RBP14.1□□□□□ -0.15
SPG7-213ENST00000566221 RNF175Q8N4F7 328 aa14.1□□□□□ -0.15
SPG7-213ENST00000566221 BCAS4Q8TDM0 211 aa14.1□□□□□ -0.15
SPG7-213ENST00000566221 GAL3ST3Q96A11 431 aa14.1□□□□□ -0.15
SPG7-213ENST00000566221 C19orf60Q96EN9 201 aa14.1□□□□□ -0.15
SPG7-213ENST00000566221 HBEGFQ99075 208 aa14.1□□□□□ -0.15
SPG7-213ENST00000566221 FGFR1OP2Q9NVK5 253 aa14.1□□□□□ -0.15
SPG7-213ENST00000566221 NMRK1Q9NWW6 199 aa14.1□□□□□ -0.15
SPG7-213ENST00000566221 SLC39A1Q9NY26 324 aa14.1□□□□□ -0.15
SPG7-213ENST00000566221 SRPK3Q9UPE1 567 aa14.1□□□□□ -0.15
SPG7-213ENST00000566221 RUVBL1Q9Y265 456 aaKnown RBP14.1□□□□□ -0.15
SPG7-213ENST00000566221 SDK2Q58EX2 2172 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 FAM149AA5PLN7 773 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 SLC28A1O00337 649 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 NDUFAB1O14561 156 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 RGS14O43566 566 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 SEMA3DO95025 777 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 TGFB1P01137 390 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 CTSBP07858 339 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 TROVE2P10155 538 aaKnown RBP eCLIP14.09□□□□□ -0.15
SPG7-213ENST00000566221 HNRNPH1P31943 449 aaKnown RBP14.09□□□□□ -0.15
SPG7-213ENST00000566221 RAP1GDS1P52306 607 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 BTKQ06187 659 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 TGM3Q08188 693 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 HYAL2Q12891 473 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 CUL3Q13618 768 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 NDUFA9Q16795 377 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.09□□□□□ -0.15
SPG7-213ENST00000566221 XKR7Q5GH72 579 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 GKAP1Q5VSY0 366 aaPredicted RBP14.09□□□□□ -0.15
SPG7-213ENST00000566221 YOD1Q5VVQ6 348 aaPredicted RBP14.09□□□□□ -0.15
SPG7-213ENST00000566221 GARNL3Q5VVW2 1013 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 TMEM214Q6NUQ4 689 aaKnown RBP14.09□□□□□ -0.15
SPG7-213ENST00000566221 CEACAM20Q6UY09 585 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 ABHD13Q7L211 337 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 PIGWQ7Z7B1 504 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 TMEM126BQ8IUX1 230 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 SRFBP1Q8NEF9 429 aaKnown RBP14.09□□□□□ -0.15
SPG7-213ENST00000566221 ZPBPQ9BS86 351 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 ACPTQ9BZG2 426 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 SPRTNQ9H040 489 aaPredicted RBP14.09□□□□□ -0.15
SPG7-213ENST00000566221 TUBB1Q9H4B7 451 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 STARD5Q9NSY2 213 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 RIC8BQ9NVN3 520 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 PISDQ9UG56 409 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 SLC12A4Q9UP95 1085 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 SATB2Q9UPW6 733 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 NUP210LQ5VU65 1888 aa14.09□□□□□ -0.15
SPG7-213ENST00000566221 ANKRD11Q6UB99 2663 aaPredicted RBP14.08□□□□□ -0.15
SPG7-213ENST00000566221 LRIT2A6NDA9 550 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 RSL1D1O76021 490 aaKnown RBP14.08□□□□□ -0.16
SPG7-213ENST00000566221 TBX6O95947 436 aaPredicted RBP14.08□□□□□ -0.16
SPG7-213ENST00000566221 LINC00032P0C843 101 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 ALOX15P16050 662 aaPredicted RBP14.08□□□□□ -0.16
SPG7-213ENST00000566221 ITIH1P19827 911 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 ETV5P41161 510 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 ARFIP1P53367 373 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 MAPK10P53779 464 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 ARSFP54793 590 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 HERC3Q15034 1050 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 MUM1Q2TAK8 710 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 FAM214AQ32MH5 1076 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 DCAF12Q5T6F0 453 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 DEPDC1Q5TB30 811 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 TRIM40Q6P9F5 258 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 SCIMPQ6UWF3 145 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 ARHGEF39Q8N4T4 335 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 KCT2Q8NC54 265 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 OR2L5Q8NG80 312 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 ZCCHC10Q8TBK6 192 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 MS4A6EQ96DS6 147 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 C10orf90Q96M02 699 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 TEFMQ96QE5 360 aaKnown RBP14.08□□□□□ -0.16
SPG7-213ENST00000566221 F2RL3Q96RI0 385 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 TAAR9Q96RI9 348 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 MACROD1Q9BQ69 325 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 NDC1Q9BTX1 674 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 DDA1Q9BW61 102 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 TRIM55Q9BYV6 548 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 NUF2Q9BZD4 464 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 ASPSCR1Q9BZE9 553 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 REXO4Q9GZR2 422 aaKnown RBP14.08□□□□□ -0.16
SPG7-213ENST00000566221 OR51B5Q9H339 312 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 MEAF6Q9HAF1 191 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 APMAPQ9HDC9 416 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.08□□□□□ -0.16
SPG7-213ENST00000566221 VPS29Q9UBQ0 182 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 PCDHB3Q9Y5E6 796 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 PCDHGA8Q9Y5G5 932 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 PTGDR2Q9Y5Y4 395 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 SLC22A7Q9Y694 548 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 USH1CQ9Y6N9 552 aa14.08□□□□□ -0.16
SPG7-213ENST00000566221 SCN2AQ99250 2005 aa14.07□□□□□ -0.16
SPG7-213ENST00000566221 A0A088AWK7 358 aa14.07□□□□□ -0.16
SPG7-213ENST00000566221 A0A1W2PNU3 283 aaPredicted RBP14.07□□□□□ -0.16
SPG7-213ENST00000566221 HYKKA2RU49 373 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms