RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 URADA6NGE7 173 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 ZNF860A6NHJ4 632 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 NDC80O14777 642 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 TTI1O43156 1089 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 DNAJB6O75190 326 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 HNMTP50135 292 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 KCNK10P57789 538 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 SLC26A5P58743 744 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 ACTN3Q08043 901 aaPredicted RBP16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 HYAL2Q12891 473 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 ZNF766Q5HY98 468 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 QSOX2Q6ZRP7 698 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 TICAM1Q8IUC6 712 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 CRLF3Q8IUI8 442 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 FBXO36Q8NEA4 188 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 ELP5Q8TE02 316 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 TSLPQ969D9 159 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 SCMH1Q96GD3 660 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 CAPZA3Q96KX2 299 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 AIF1LQ9BQI0 150 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 TRIM51Q9BSJ1 452 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 SLC22A14Q9Y267 594 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 DYRK1BQ9Y463 629 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 OARD1Q9Y530 152 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 KCNE2Q9Y6J6 123 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 CRYBG3Q68DQ2 2970 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 SVILO95425 2214 aa16.18■□□□□ 0.18
VPS9D1-203ENST00000563798 IGKV3D-11A0A0A0MRZ8 115 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 FAM95CA0A1B0GW59 222 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 CTAGE15A4D2H0 777 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 CDC7O00311 574 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 ZG16O60844 167 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 WISP3O95389 354 aaPredicted RBP16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 SERPINA6P08185 405 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 ZNF888P0CJ79 500 aaPredicted RBP16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 CD96P40200 585 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 OR4D2P58180 307 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 TAS2R39P59534 338 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 GNG11P61952 73 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 PDIA2Q13087 525 aaKnown RBP16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 FASTKD3Q14CZ7 662 aaKnown RBP16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 GFRALQ6UXV0 394 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 CTAGE6Q86UF2 777 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 FJX1Q86VR8 437 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 ANKMY2Q8IV38 441 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 ARMC10Q8N2F6 343 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 SLC5A8Q8N695 610 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 CREB3L4Q8TEY5 395 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 NAPGQ99747 312 aaPredicted RBP16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 UTP23Q9BRU9 249 aaKnown RBP16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 RHOJQ9H4E5 214 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 COPG2Q9UBF2 871 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 SEC14L3Q9UDX4 400 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 ENTPD4Q9Y227 616 aa16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 DIDO1Q9BTC0 2240 aaKnown RBP16.17■□□□□ 0.18
VPS9D1-203ENST00000563798 ASPDHA6ND91 283 aa16.16■□□□□ 0.18
VPS9D1-203ENST00000563798 EFCAB8A8MWE9 144 aa16.16■□□□□ 0.18
VPS9D1-203ENST00000563798 CDC123O75794 336 aaPredicted RBP16.16■□□□□ 0.18
VPS9D1-203ENST00000563798 UNC5CO95185 931 aa16.16■□□□□ 0.18
VPS9D1-203ENST00000563798 GSTM2P28161 218 aa16.16■□□□□ 0.18
VPS9D1-203ENST00000563798 SLC6A12P48065 614 aa16.16■□□□□ 0.18
VPS9D1-203ENST00000563798 TAS2R50P59544 299 aa16.16■□□□□ 0.18
VPS9D1-203ENST00000563798 C1QL3Q5VWW1 255 aa16.16■□□□□ 0.18
VPS9D1-203ENST00000563798 FCRLBQ6BAA4 426 aa16.16■□□□□ 0.18
VPS9D1-203ENST00000563798 CYS1Q717R9 158 aa16.16■□□□□ 0.18
VPS9D1-203ENST00000563798 ADAMTSL2Q86TH1 951 aa16.16■□□□□ 0.18
VPS9D1-203ENST00000563798 THAP3Q8WTV1 239 aaPredicted RBP16.16■□□□□ 0.18
VPS9D1-203ENST00000563798 ANKRD49Q8WVL7 239 aa16.16■□□□□ 0.18
VPS9D1-203ENST00000563798 VPS39Q96JC1 886 aa16.16■□□□□ 0.18
VPS9D1-203ENST00000563798 SEC16BQ96JE7 1060 aa16.16■□□□□ 0.18
VPS9D1-203ENST00000563798 TSNARE1Q96NA8 513 aa16.16■□□□□ 0.18
VPS9D1-203ENST00000563798 SIGLEC12Q96PQ1 595 aa16.16■□□□□ 0.18
VPS9D1-203ENST00000563798 RBCK1Q9BYM8 510 aa16.16■□□□□ 0.18
VPS9D1-203ENST00000563798 TRIM45Q9H8W5 580 aaPredicted RBP16.16■□□□□ 0.18
VPS9D1-203ENST00000563798 TCRBV16S1A1N1A0A5B0 115 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 NPEPPSL1A6NEC2 478 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 MAN1A2O60476 641 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 PRMT3O60678 531 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 B3GALT4O96024 378 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 SERPIND1P05546 499 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 GNAZP19086 355 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 PAFAH1B1P43034 410 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 CA7P43166 264 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 RPL21P46778 160 aaKnown RBP16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 OLR1P78380 273 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 OR1C1Q15619 314 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 CDKL4Q5MAI5 379 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 SLCO4C1Q6ZQN7 724 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 TMPRSS11BQ86T26 416 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 CEP97Q8IW35 865 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 HORMAD2Q8N7B1 307 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 BBOF1Q8ND07 529 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 NFAM1Q8NET5 270 aaPredicted RBP16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 RHBDF1Q96CC6 855 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 PTCHD1Q96NR3 888 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 PITHD1Q9GZP4 211 aaPredicted RBP16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 DERL2Q9GZP9 239 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 AICDAQ9GZX7 198 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 NT5DC2Q9H857 520 aa16.15■□□□□ 0.18
VPS9D1-203ENST00000563798 PRDM9Q9NQV7 894 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms