RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 RNF123Q5XPI4 1314 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 IGKV6D-21A0A0A0MT36 114 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 A0A1B0GTH9 108 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 NKX6-3A6NJ46 265 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 SIGLEC5O15389 551 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 WDHD1O75717 1129 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 STARD3NLO95772 234 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 MT-ND1P03886 318 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 MYL6BP14649 208 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 CD1DP15813 335 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 ACHEP22303 614 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 ELK3P41970 407 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 RIDAP52758 137 aaKnown RBP2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 MTCP1P56278 107 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 CRY2Q49AN0 593 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 ERMARDQ5T6L9 678 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 DHRS11Q6UWP2 260 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 RBPMS2Q6ZRY4 209 aaKnown RBP2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 LURAP1Q96LR2 239 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 PAPOLGQ9BWT3 736 aaKnown RBP2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 STRADBQ9C0K7 418 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 POLLQ9UGP5 575 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 AUP1Q9Y679 476 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 PASKQ96RG2 1323 aa2.42□□□□□ -2.02
HMGB1P33-201ENST00000563485 HEG1Q9ULI3 1381 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 K7ENM7 598 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 RECQL5O94762 991 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 ZNF19P17023 458 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 ZBTB25P24278 435 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 DRD3P35462 400 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 CAPZA2P47755 286 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 RAB28P51157 221 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 GCKRQ14397 625 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 BECN1Q14457 450 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 KNOP1Q1ED39 458 aaKnown RBP2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 TMEM44Q2T9K0 475 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 GPR139Q6DWJ6 353 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 EMBQ6PCB8 327 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 MCM10Q7L590 875 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 HIPK1Q86Z02 1210 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 CERS3Q8IU89 383 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 PARP8Q8N3A8 854 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 P2RX5Q93086 422 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 HDAC11Q96DB2 347 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 GDAP1L1Q96MZ0 367 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 LINC00167Q96N53 147 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 ZNF558Q96NG5 402 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 APOL2Q9BQE5 337 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 FZD8Q9H461 694 aa2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 ZNF346Q9UL40 294 aaKnown RBP2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 TDRD6O60522 2096 aaKnown RBP2.41□□□□□ -2.02
HMGB1P33-201ENST00000563485 FAM168BA1KXE4 195 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 A8MU76 341 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 HAT1O14929 419 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 INPP4BO15327 924 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 KIF5CO60282 957 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 DIAPH2O60879 1101 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 SEMA4FO95754 770 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 LY6G6DO95868 133 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 EPORP19235 508 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 CPT2P23786 658 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 MATKP42679 507 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 CYLC2Q14093 348 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 RFTN1Q14699 578 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 ZNF506Q5JVG8 444 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 FUT10Q6P4F1 479 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 Q6ZVQ6 151 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 SERINC5Q86VE9 423 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 AMIGO1Q86WK6 493 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 MFN1Q8IWA4 741 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 TEX26Q8N6G2 289 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 KIAA1524Q8TCG1 905 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 RADILQ96JH8 1075 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 GTPBP2Q9BX10 602 aaKnown RBP2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 YTHDF1Q9BYJ9 559 aaKnown RBP2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 SNX25Q9H3E2 840 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 MARCH7Q9H992 704 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 C3orf14Q9HBI5 128 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 EXOC1Q9NV70 894 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 SLC12A6Q9UHW9 1150 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 SALL1Q9NSC2 1324 aa2.4□□□□□ -2.03
HMGB1P33-201ENST00000563485 SRRM4A7MD48 611 aaKnown RBP2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 E5RGE8 158 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 MT-ND2P03891 347 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 QDPRP09417 244 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 ANPEPP15144 967 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 ACAT1P24752 427 aaKnown RBP2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 FCGR2BP31994 310 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 FCGR2CP31995 323 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 CHRNA3P32297 505 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 FEN1P39748 380 aaKnown RBP2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 SLC1A4P43007 532 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 SULT2A1Q06520 285 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 NHLRC3Q5JS37 347 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 RSBN1Q5VWQ0 802 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 MOXD1Q6UVY6 613 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 ENPP7Q6UWV6 458 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 ENOSF1Q7L5Y1 443 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 TRMT11Q7Z4G4 463 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms