RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 HAT1O14929 419 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 ZW10O43264 779 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 TBX19O60806 448 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 SCN2BO60939 215 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 KLHL18O94889 574 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 UGT2B7P16662 529 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 MAOBP27338 520 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 TPP2P29144 1249 aaPredicted RBP16.36■□□□□ 0.21
HDDC3-206ENST00000561036 PTPN6P29350 595 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 GRIA3P42263 894 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 RHDQ02161 417 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 C2orf80Q0P641 193 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 C1orf61Q13536 156 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 CWF19L1Q69YN2 538 aaKnown RBP16.36■□□□□ 0.21
HDDC3-206ENST00000561036 WDR5BQ86VZ2 330 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 SPATA24Q86W54 205 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 AQP12AQ8IXF9 295 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 MSRB3Q8IXL7 192 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 NATD1Q8N6N6 113 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 HIPK4Q8NE63 616 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 PATE1Q8WXA2 126 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 PYDC1Q8WXC3 89 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 ZNF764Q96H86 408 aaPredicted RBP16.36■□□□□ 0.21
HDDC3-206ENST00000561036 LRGUKQ96M69 825 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 ECSITQ9BQ95 431 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 ZNF717Q9BY31 904 aaPredicted RBP16.36■□□□□ 0.21
HDDC3-206ENST00000561036 PCDHAC1Q9H158 963 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 DDX31Q9H8H2 851 aaKnown RBP16.36■□□□□ 0.21
HDDC3-206ENST00000561036 SLC25A37Q9NYZ2 338 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 PCDHB3Q9Y5E6 796 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 SNX13Q9Y5W8 968 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 TCRBV3S1A0A5B6 114 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 RNASET2O00584 256 aaKnown RBP16.35■□□□□ 0.21
HDDC3-206ENST00000561036 BCAT2O15382 392 aaPredicted RBP16.35■□□□□ 0.21
HDDC3-206ENST00000561036 FURINP09958 794 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 ZCCHC18P0CG32 403 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 LAMP1P11279 417 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 PIM1P11309 404 aaPredicted RBP16.35■□□□□ 0.21
HDDC3-206ENST00000561036 TSFMP43897 325 aaKnown RBP16.35■□□□□ 0.21
HDDC3-206ENST00000561036 FASLGP48023 281 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 AFF3P51826 1226 aaKnown RBP16.35■□□□□ 0.21
HDDC3-206ENST00000561036 MAPK12P53778 367 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 C21orf59P57076 290 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 TAS2R50P59544 299 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 HHEXQ03014 270 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 TGM3Q08188 693 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 CYP4F3Q08477 520 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 MAP7Q14244 749 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 TEAD4Q15561 434 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.35■□□□□ 0.21
HDDC3-206ENST00000561036 PROSER1Q86XN7 944 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 TMEFF1Q8IYR6 380 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 LMX1AQ8TE12 382 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 PPCDCQ96CD2 204 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 RSRC1Q96IZ7 334 aaKnown RBP16.35■□□□□ 0.21
HDDC3-206ENST00000561036 PHF12Q96QT6 1004 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 CPPED1Q9BRF8 314 aaPredicted RBP16.35■□□□□ 0.21
HDDC3-206ENST00000561036 THUMPD3Q9BV44 507 aaKnown RBP16.35■□□□□ 0.21
HDDC3-206ENST00000561036 ERVMER34-1Q9H9K5 563 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 PRMT8Q9NR22 394 aaPredicted RBP16.35■□□□□ 0.21
HDDC3-206ENST00000561036 C6orf203Q9P0P8 240 aaPredicted RBP16.35■□□□□ 0.21
HDDC3-206ENST00000561036 EXO1Q9UQ84 846 aaKnown RBP16.35■□□□□ 0.21
HDDC3-206ENST00000561036 PCDHB14Q9Y5E9 798 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 GMEB1Q9Y692 573 aa16.35■□□□□ 0.21
HDDC3-206ENST00000561036 EYSQ5T1H1 3165 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 B4DGG1 531 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 LMO7DNF2Z398 122 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 H3BNX3 289 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 ANP32DO95626 131 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 POLR2CP19387 275 aaPredicted RBP16.34■□□□□ 0.21
HDDC3-206ENST00000561036 PTDSS1P48651 473 aaKnown RBP16.34■□□□□ 0.21
HDDC3-206ENST00000561036 MTPNP58546 118 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 STXBP1P61764 594 aaKnown RBP16.34■□□□□ 0.21
HDDC3-206ENST00000561036 PLIN5Q00G26 463 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 KLC1Q07866 573 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 DMWDQ09019 674 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 TJAP1Q5JTD0 557 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 OR4C11Q6IEV9 310 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 KLHL35Q6PF15 583 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 FIGLAQ6QHK4 219 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 SPESP1Q6UW49 350 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 UBE3DQ7Z6J8 389 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 OOSP2Q86WS3 158 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 C17orf82Q86X59 251 aaPredicted RBP16.34■□□□□ 0.21
HDDC3-206ENST00000561036 PLD3Q8IV08 490 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 FAM20CQ8IXL6 584 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 OR10G6Q8NH81 332 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 NT5CQ8TCD5 201 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 PANX1Q96RD7 426 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 INPP5KQ9BT40 448 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 TBCDQ9BTW9 1192 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.34■□□□□ 0.21
HDDC3-206ENST00000561036 CD320Q9NPF0 282 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 LHX9Q9NQ69 397 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 DOLKQ9UPQ8 538 aa16.34■□□□□ 0.21
HDDC3-206ENST00000561036 A0A0J9YY10 115 aa16.33■□□□□ 0.2
HDDC3-206ENST00000561036 GSAPA4D1B5 854 aa16.33■□□□□ 0.2
HDDC3-206ENST00000561036 OR5K3A6NET4 321 aa16.33■□□□□ 0.2
HDDC3-206ENST00000561036 EVPLLA8MZ36 301 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms