RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 CROCCQ5TZA2 2017 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 IGHV1-45A0A0A0MS14 117 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 IGKV1-8A0A0C4DH67 115 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 A0A1B0GUH1 482 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 GOLGA8TH3BQL2 631 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 GOLGA8RI6L899 631 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 EIF3FO00303 357 aaPredicted RBP12.87□□□□□ -0.35
SMAD3-214ENST00000560402 HEXBP07686 556 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 STSP08842 583 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 SLC26A3P40879 764 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 HNRNPH2P55795 449 aaKnown RBP12.87□□□□□ -0.35
SMAD3-214ENST00000560402 FAM53BQ14153 422 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 VWA2Q5GFL6 755 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 MROH9Q5TGP6 573 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 ZNF470Q6ECI4 717 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 NEPROQ6NW34 567 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 FBXO42Q6P3S6 717 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 CES3Q6UWW8 571 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 STRA8Q7Z7C7 330 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 LCA5Q86VQ0 697 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 TICAM1Q8IUC6 712 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 RAB3IL1Q8TBN0 382 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 C8orf44Q96CB5 159 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 MMABQ96EY8 250 aaPredicted RBP12.87□□□□□ -0.35
SMAD3-214ENST00000560402 SEC16BQ96JE7 1060 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 OR2A5Q96R48 311 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 PKP4Q99569 1192 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 RBBP8Q99708 897 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 PLAC1Q9HBJ0 212 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 SMYD2Q9NRG4 433 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 COMMD10Q9Y6G5 202 aa12.87□□□□□ -0.35
SMAD3-214ENST00000560402 LOC102723996A0A087X1L8 192 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 ZCWPW2A0A1B0GU75 182 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 ENO4A6NNW6 628 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 E7ENX8 843 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 LRRTM2O43300 516 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 KLHL18O94889 574 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 SLC16A8O95907 504 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 GSTA1P08263 222 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 TROVE2P10155 538 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMAD3-214ENST00000560402 ICAM2P13598 275 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 HRH2P25021 359 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 TYK2P29597 1187 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 CRHR1P34998 444 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 TNFSF10P50591 281 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 CLCN7P51798 805 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 WDR4P57081 412 aaKnown RBP12.86□□□□□ -0.35
SMAD3-214ENST00000560402 TAP2Q03519 686 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 EEF1A2Q05639 463 aaKnown RBP12.86□□□□□ -0.35
SMAD3-214ENST00000560402 TSTA3Q13630 321 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-214ENST00000560402 BMPR2Q13873 1038 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 MPP2Q14168 576 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 HKDC1Q2TB90 917 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 ATG16L1Q676U5 607 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 LRRC8EQ6NSJ5 796 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 KIAA0408Q6ZU52 694 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 CCDC121Q6ZUS5 278 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 ARHGEF39Q8N4T4 335 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 AMER3Q8N944 861 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 OR1N1Q8NGS0 311 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 BRIX1Q8TDN6 353 aaKnown RBP12.86□□□□□ -0.35
SMAD3-214ENST00000560402 ZNF480Q8WV37 535 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 HAS2Q92819 552 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 FAM136AQ96C01 138 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 TUBB6Q9BUF5 446 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 ZNF700Q9H0M5 742 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 PTGFRNQ9P2B2 879 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 OSGIN2Q9Y236 505 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 CREBBPQ92793 2442 aa12.86□□□□□ -0.35
SMAD3-214ENST00000560402 SCN2AQ99250 2005 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 FOXO6A8MYZ6 492 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 H0YIG0 161 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 FOXS1O43638 330 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 ZBTB14O43829 449 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 PIAS1O75925 651 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 WFS1O76024 890 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 ALDH3A1P30838 453 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 SKIV2L2P42285 1042 aaKnown RBP12.85□□□□□ -0.35
SMAD3-214ENST00000560402 AVPR1BP47901 424 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 YBX1P67809 324 aaKnown RBP12.85□□□□□ -0.35
SMAD3-214ENST00000560402 ZRSR2Q15696 482 aaKnown RBP12.85□□□□□ -0.35
SMAD3-214ENST00000560402 ZKSCAN8Q15776 578 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-214ENST00000560402 HSP90AA5PQ58FG0 334 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 ZNF324BQ6AW86 544 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-214ENST00000560402 TMEM205Q6UW68 189 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 SPATA21Q7Z572 469 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 ADCK2Q7Z695 626 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 YTHDF3Q7Z739 585 aaKnown RBP12.85□□□□□ -0.35
SMAD3-214ENST00000560402 ZC3H7AQ8IWR0 971 aaKnown RBP12.85□□□□□ -0.35
SMAD3-214ENST00000560402 CCDC63Q8NA47 563 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 GIMAP7Q8NHV1 300 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 SUN3Q8TAQ9 357 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 ASB11Q8WXH4 323 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 PSMF1Q92530 271 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 NR4A3Q92570 626 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 ELAC2Q9BQ52 826 aaKnown RBP12.85□□□□□ -0.35
SMAD3-214ENST00000560402 YIPF2Q9BWQ6 316 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 CCDC177Q9NQR7 707 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-214ENST00000560402 IARS2Q9NSE4 1012 aaKnown RBP12.85□□□□□ -0.35
SMAD3-214ENST00000560402 FGFR1OP2Q9NVK5 253 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms