RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 SNRPB2P08579 225 aaKnown RBP16.34■□□□□ 0.21
CRTC3-208ENST00000560098 ALOX12P18054 663 aa16.34■□□□□ 0.21
CRTC3-208ENST00000560098 AP1S2P56377 157 aa16.34■□□□□ 0.21
CRTC3-208ENST00000560098 IL2P60568 153 aa16.34■□□□□ 0.21
CRTC3-208ENST00000560098 CCZ1BP86790 482 aa16.34■□□□□ 0.21
CRTC3-208ENST00000560098 CCZ1P86791 482 aaPredicted RBP16.34■□□□□ 0.21
CRTC3-208ENST00000560098 SLC25A25Q6KCM7 469 aa16.34■□□□□ 0.21
CRTC3-208ENST00000560098 NIPAL1Q6NVV3 410 aa16.34■□□□□ 0.21
CRTC3-208ENST00000560098 KIAA0408Q6ZU52 694 aa16.34■□□□□ 0.21
CRTC3-208ENST00000560098 STRA8Q7Z7C7 330 aa16.34■□□□□ 0.21
CRTC3-208ENST00000560098 CNTN4Q8IWV2 1026 aa16.34■□□□□ 0.21
CRTC3-208ENST00000560098 TBC1D19Q8N5T2 526 aa16.34■□□□□ 0.21
CRTC3-208ENST00000560098 ELP5Q8TE02 316 aa16.34■□□□□ 0.21
CRTC3-208ENST00000560098 ADAMTS18Q8TE60 1221 aa16.34■□□□□ 0.21
CRTC3-208ENST00000560098 OR4K3Q96R72 315 aa16.34■□□□□ 0.21
CRTC3-208ENST00000560098 TRIM54Q9BYV2 358 aa16.34■□□□□ 0.21
CRTC3-208ENST00000560098 NPIPA1Q9UND3 350 aa16.34■□□□□ 0.21
CRTC3-208ENST00000560098 SCN3AQ9NY46 2000 aa16.33■□□□□ 0.2
CRTC3-208ENST00000560098 SERPIND1P05546 499 aa16.33■□□□□ 0.2
CRTC3-208ENST00000560098 FNTAP49354 379 aa16.33■□□□□ 0.2
CRTC3-208ENST00000560098 OLR1P78380 273 aa16.33■□□□□ 0.2
CRTC3-208ENST00000560098 RGS1Q08116 209 aa16.33■□□□□ 0.2
CRTC3-208ENST00000560098 PDAP1Q13442 181 aaKnown RBP16.33■□□□□ 0.2
CRTC3-208ENST00000560098 SPANXN3Q5MJ09 141 aa16.33■□□□□ 0.2
CRTC3-208ENST00000560098 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.33■□□□□ 0.2
CRTC3-208ENST00000560098 RPS19BP1Q86WX3 136 aaKnown RBP16.33■□□□□ 0.2
CRTC3-208ENST00000560098 SIAH3Q8IW03 269 aa16.33■□□□□ 0.2
CRTC3-208ENST00000560098 NT5CQ8TCD5 201 aa16.33■□□□□ 0.2
CRTC3-208ENST00000560098 ATL1Q8WXF7 558 aa16.33■□□□□ 0.2
CRTC3-208ENST00000560098 MEMO1Q9Y316 297 aa16.33■□□□□ 0.2
CRTC3-208ENST00000560098 DCHS2Q6V1P9 2916 aa16.33■□□□□ 0.2
CRTC3-208ENST00000560098 ASNA1O43681 348 aa16.32■□□□□ 0.2
CRTC3-208ENST00000560098 B4GALT2O60909 372 aa16.32■□□□□ 0.2
CRTC3-208ENST00000560098 B3GALT4O96024 378 aa16.32■□□□□ 0.2
CRTC3-208ENST00000560098 ZNF888P0CJ79 500 aaPredicted RBP16.32■□□□□ 0.2
CRTC3-208ENST00000560098 POU3F2P20265 443 aaPredicted RBP16.32■□□□□ 0.2
CRTC3-208ENST00000560098 CSHL1Q14406 222 aa16.32■□□□□ 0.2
CRTC3-208ENST00000560098 PPP1R7Q15435 360 aa16.32■□□□□ 0.2
CRTC3-208ENST00000560098 MAPKAPK3Q16644 382 aa16.32■□□□□ 0.2
CRTC3-208ENST00000560098 CATSPEREQ5SY80 951 aa16.32■□□□□ 0.2
CRTC3-208ENST00000560098 ZNF468Q5VIY5 522 aaPredicted RBP16.32■□□□□ 0.2
CRTC3-208ENST00000560098 ABHD13Q7L211 337 aa16.32■□□□□ 0.2
CRTC3-208ENST00000560098 GALNT7Q86SF2 657 aa16.32■□□□□ 0.2
CRTC3-208ENST00000560098 KIF2BQ8N4N8 673 aa16.32■□□□□ 0.2
CRTC3-208ENST00000560098 FBXL8Q96CD0 374 aa16.32■□□□□ 0.2
CRTC3-208ENST00000560098 CERS2Q96G23 380 aa16.32■□□□□ 0.2
CRTC3-208ENST00000560098 LURAP1Q96LR2 239 aa16.32■□□□□ 0.2
CRTC3-208ENST00000560098 PTCHD1Q96NR3 888 aa16.32■□□□□ 0.2
CRTC3-208ENST00000560098 NAT9Q9BTE0 207 aa16.32■□□□□ 0.2
CRTC3-208ENST00000560098 ZFP69BQ9UJL9 534 aa16.32■□□□□ 0.2
CRTC3-208ENST00000560098 GOLGA6L10A0A0M3HER8 536 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 PRMT3O60678 531 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 BANF1O75531 89 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 SLC25A12O75746 678 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 GUCA1CO95843 209 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 TPP2P29144 1249 aaPredicted RBP16.31■□□□□ 0.2
CRTC3-208ENST00000560098 AHRP35869 848 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 SCTRP47872 440 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 MSS51Q4VC12 460 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 HECTD2Q5U5R9 776 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 QSOX2Q6ZRP7 698 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 CYP4X1Q8N118 509 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 GHDCQ8N2G8 530 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 ACTRT1Q8TDG2 376 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 UTP15Q8TED0 518 aaKnown RBP16.31■□□□□ 0.2
CRTC3-208ENST00000560098 SLC5A11Q8WWX8 675 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 NEIL2Q969S2 332 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 TRIM51Q9BSJ1 452 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 TRIM8Q9BZR9 551 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 SPNS1Q9H2V7 528 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 CLK4Q9HAZ1 481 aaKnown RBP16.31■□□□□ 0.2
CRTC3-208ENST00000560098 GPAMQ9HCL2 828 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 PPANQ9NQ55 473 aaKnown RBP16.31■□□□□ 0.2
CRTC3-208ENST00000560098 SLC17A6Q9P2U8 582 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 TEP1Q99973 2627 aaKnown RBP16.31■□□□□ 0.2
CRTC3-208ENST00000560098 TACC2O95359 2948 aa16.31■□□□□ 0.2
CRTC3-208ENST00000560098 DNALI1O14645 258 aaPredicted RBP16.3■□□□□ 0.2
CRTC3-208ENST00000560098 NRDCO43847 1150 aa16.3■□□□□ 0.2
CRTC3-208ENST00000560098 NME2P1O60361 137 aa16.3■□□□□ 0.2
CRTC3-208ENST00000560098 CLDN14O95500 239 aa16.3■□□□□ 0.2
CRTC3-208ENST00000560098 ENO2P09104 434 aaPredicted RBP16.3■□□□□ 0.2
CRTC3-208ENST00000560098 ABOP16442 354 aa16.3■□□□□ 0.2
CRTC3-208ENST00000560098 ZNF24P17028 368 aa16.3■□□□□ 0.2
CRTC3-208ENST00000560098 NME2P22392 152 aa16.3■□□□□ 0.2
CRTC3-208ENST00000560098 CYB561P49447 251 aa16.3■□□□□ 0.2
CRTC3-208ENST00000560098 PGGT1BP53609 377 aa16.3■□□□□ 0.2
CRTC3-208ENST00000560098 BTG2P78543 158 aa16.3■□□□□ 0.2
CRTC3-208ENST00000560098 CDSNQ15517 529 aa16.3■□□□□ 0.2
CRTC3-208ENST00000560098 TEDDM1Q5T9Z0 273 aa16.3■□□□□ 0.2
CRTC3-208ENST00000560098 IGDCC3Q8IVU1 814 aa16.3■□□□□ 0.2
CRTC3-208ENST00000560098 GPATCH11Q8N954 259 aa16.3■□□□□ 0.2
CRTC3-208ENST00000560098 MTFMTQ96DP5 389 aaKnown RBP16.3■□□□□ 0.2
CRTC3-208ENST00000560098 TSNARE1Q96NA8 513 aa16.3■□□□□ 0.2
CRTC3-208ENST00000560098 OLFM1Q99784 485 aa16.3■□□□□ 0.2
CRTC3-208ENST00000560098 TRIM45Q9H8W5 580 aaPredicted RBP16.3■□□□□ 0.2
CRTC3-208ENST00000560098 ASIC3Q9UHC3 531 aa16.3■□□□□ 0.2
CRTC3-208ENST00000560098 CORO1CQ9ULV4 474 aaPredicted RBP16.3■□□□□ 0.2
CRTC3-208ENST00000560098 VWA7Q9Y334 891 aa16.3■□□□□ 0.2
CRTC3-208ENST00000560098 AKAP9Q99996 3911 aa16.3■□□□□ 0.2
CRTC3-208ENST00000560098 URADA6NGE7 173 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms