RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 C14orf105Q9NVL8 296 aa14.03□□□□□ -0.16
RABGGTA-211ENST00000559850 GPRC5BQ9NZH0 403 aa14.03□□□□□ -0.16
RABGGTA-211ENST00000559850 CPSF2Q9P2I0 782 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-211ENST00000559850 ZNF490Q9ULM2 529 aaPredicted RBP14.03□□□□□ -0.16
RABGGTA-211ENST00000559850 SLC22A7Q9Y694 548 aa14.03□□□□□ -0.16
RABGGTA-211ENST00000559850 J3QKU1 62 aa14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 ZIC2O95409 532 aaPredicted RBP14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 COX6A1P12074 109 aa14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 GFAPP14136 432 aa14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 HNRNPH1P31943 449 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 MAGEA12P43365 314 aa14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 SERPINB9P50453 376 aa14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 CHIT1Q13231 466 aa14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 MYBPC3Q14896 1274 aa14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 PFKFB4Q16877 469 aa14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 TECRLQ5HYJ1 363 aa14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 TMIGD1Q6UXZ0 262 aa14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 LRRC70Q7Z2Q7 622 aa14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 THOC3Q96J01 351 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 VN1R1Q9GZP7 353 aa14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 RHBGQ9H310 441 aa14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 EPB41L4BQ9H329 900 aa14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 ZNF552Q9H707 407 aaPredicted RBP14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 ANAPC2Q9UJX6 822 aa14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 ZNF451Q9Y4E5 1061 aa14.02□□□□□ -0.17
RABGGTA-211ENST00000559850 CHST10O43529 356 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 SH3BGRLO75368 114 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 KRT38O76015 456 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 SIX3O95343 332 aaPredicted RBP14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 TBX6O95947 436 aaPredicted RBP14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 HPP00738 406 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 ABHD2P08910 425 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 CXCR2P25025 360 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 CASRP41180 1078 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 MLLT10P55197 1068 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 IRF8Q02556 426 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 AIMP2Q13155 320 aaKnown RBP14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 SLC29A2Q14542 456 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 HERC3Q15034 1050 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 SETDB1Q15047 1291 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 ACAP2Q15057 778 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 IGFBP7Q16270 282 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 TRMT10CQ7L0Y3 403 aaKnown RBP14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 TAOK1Q7L7X3 1001 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 KRT78Q8N1N4 520 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 RNF175Q8N4F7 328 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 TEX9Q8N6V9 391 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 RBMXL3Q8N7X1 1067 aaKnown RBP14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 TRPV3Q8NET8 790 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 RHEBL1Q8TAI7 183 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 UBTD2Q8WUN7 234 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 TSLPQ969D9 159 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 ISL2Q96A47 359 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 SCYL1Q96KG9 808 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 SMAD5Q99717 465 aaKnown RBP14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 PRM3Q9NNZ6 103 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 OPTCQ9UBM4 332 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 ZNF180Q9UJW8 692 aa14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 G3BP2Q9UN86 482 aaKnown RBP14.01□□□□□ -0.17
RABGGTA-211ENST00000559850 IGHV1-45A0A0A0MS14 117 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 NSG1A0A0A6YYJ2 146 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 SYCE1LA8MT33 242 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 FOXO6A8MYZ6 492 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 FAM227AF5H4B4 570 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 K7EPI3 171 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 SEC24DO94855 1032 aaPredicted RBP14□□□□□ -0.17
RABGGTA-211ENST00000559850 SERPINA6P08185 405 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 C8orf89P0DMQ9 161 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 SMIM10L1P0DMW3 83 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 BTN3A2P78410 334 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 PCOLCEQ15113 449 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 VWA5B1Q5TIE3 1220 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 KLC3Q6P597 504 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 TMEM205Q6UW68 189 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 ABHD13Q7L211 337 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 NDUFAF7Q7L592 441 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 PTGR2Q8N8N7 351 aaPredicted RBP14□□□□□ -0.17
RABGGTA-211ENST00000559850 NACC2Q96BF6 587 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 MS4A6EQ96DS6 147 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 WDR34Q96EX3 536 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 PTCD3Q96EY7 689 aaKnown RBP14□□□□□ -0.17
RABGGTA-211ENST00000559850 SMIM10Q96HG1 83 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 CAPS2Q9BXY5 557 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 LANCL2Q9NS86 450 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 XPR1Q9UBH6 696 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 CSAG2Q9Y5P2 127 aa14□□□□□ -0.17
RABGGTA-211ENST00000559850 FASNP49327 2511 aaKnown RBP14□□□□□ -0.17
RABGGTA-211ENST00000559850 CPAMD8Q8IZJ3 1885 aa13.99□□□□□ -0.17
RABGGTA-211ENST00000559850 LRIT2A6NDA9 550 aa13.99□□□□□ -0.17
RABGGTA-211ENST00000559850 ANKDD1BA6NHY2 528 aa13.99□□□□□ -0.17
RABGGTA-211ENST00000559850 ERI3O43414 337 aaKnown RBP13.99□□□□□ -0.17
RABGGTA-211ENST00000559850 B4GALT2O60909 372 aa13.99□□□□□ -0.17
RABGGTA-211ENST00000559850 SHBGP04278 402 aa13.99□□□□□ -0.17
RABGGTA-211ENST00000559850 SNRPAP09012 282 aaKnown RBP13.99□□□□□ -0.17
RABGGTA-211ENST00000559850 PCNAP12004 261 aa13.99□□□□□ -0.17
RABGGTA-211ENST00000559850 PLA2G16P53816 162 aa13.99□□□□□ -0.17
RABGGTA-211ENST00000559850 SOX8P57073 446 aa13.99□□□□□ -0.17
RABGGTA-211ENST00000559850 RHAGQ02094 409 aa13.99□□□□□ -0.17
RABGGTA-211ENST00000559850 PRR30Q53SZ7 412 aaPredicted RBP13.99□□□□□ -0.17
RABGGTA-211ENST00000559850 FAM219BQ5XKK7 198 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms