RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 CEACAM20Q6UY09 585 aa14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 PPP1R3BQ86XI6 285 aa14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 RNF175Q8N4F7 328 aa14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 GBP7Q8N8V2 638 aaPredicted RBP14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 KCT2Q8NC54 265 aa14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 PPP1R14CQ8TAE6 165 aa14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 UTP15Q8TED0 518 aaKnown RBP14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 STON2Q8WXE9 905 aa14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 CMTM7Q96FZ5 175 aa14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 QRFPRQ96P65 431 aa14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 ZNF317Q96PQ6 595 aaPredicted RBP14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 CCT7Q99832 543 aa14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 ASPSCR1Q9BZE9 553 aa14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 ACPTQ9BZG2 426 aa14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 SHCBP1LQ9BZQ2 653 aa14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 KLHL31Q9H511 634 aa14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 FANCEQ9HB96 536 aa14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 SLC39A1Q9NY26 324 aa14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 MSRB2Q9Y3D2 182 aa14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 B3GALT1Q9Y5Z6 326 aa14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 BAHCC1Q9P281 2608 aa14.09□□□□□ -0.15
SNRPA1-207ENST00000559309 SDK2Q58EX2 2172 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 ANKDD1BA6NHY2 528 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 NDUFS4O43181 175 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 ZNF749O43361 778 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 EDF1O60869 148 aaKnown RBP14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 CAPNS1P04632 268 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 JUNP05412 331 aaKnown RBP14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 PRR35P0CG20 571 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 PTX3P26022 381 aaPredicted RBP14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 HMOX2P30519 316 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 TSFMP43897 325 aaKnown RBP14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 HK2P52789 917 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 RPS13P62277 151 aaKnown RBP14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 KIAA0040Q15053 153 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 TMEM35AQ53FP2 167 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 C3orf38Q5JPI3 329 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 PRAMEF17Q5VTA0 474 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 ABHD17CQ6PCB6 329 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 MED25Q71SY5 747 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 PDSS2Q86YH6 399 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 LRRC34Q8IZ02 419 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 ZNF655Q8N720 491 aaPredicted RBP14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 OR2L5Q8NG80 312 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 PIWIL2Q8TC59 973 aaKnown RBP14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 TWIST2Q8WVJ9 160 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 SELENOMQ8WWX9 145 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 GAL3ST3Q96A11 431 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 RERGQ96A58 199 aaPredicted RBP14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 MVB12AQ96EY5 273 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 METTL2AQ96IZ6 378 aaKnown RBP14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 MAELQ96JY0 434 aaKnown RBP14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 FCRL1Q96LA6 429 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 GBP5Q96PP8 586 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 MTERF1Q99551 399 aaKnown RBP14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 MACROD1Q9BQ69 325 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 SCNM1Q9BWG6 230 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 ELOVL6Q9H5J4 265 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 PRDM7Q9NQW5 492 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 PNPOQ9NVS9 261 aa14.08□□□□□ -0.16
SNRPA1-207ENST00000559309 FASNP49327 2511 aaKnown RBP14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 FREM2Q5SZK8 3169 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 HYKKA2RU49 373 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 C1QTNF9BB2RNN3 333 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 DSCR3O14972 297 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 KLHL18O94889 574 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 TGDSO95455 350 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 C1QTNF9P0C862 333 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 JMJD7P0C870 316 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 ZNF28P17035 718 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 BSGP35613 385 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 ARSFP54793 590 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 FOXM1Q08050 763 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 RGS1Q08116 209 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 IFT88Q13099 833 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 MAP7Q14244 749 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 FAM214AQ32MH5 1076 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 DCAF12Q5T6F0 453 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 GALNT18Q6P9A2 607 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 MAVSQ7Z434 540 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 MYLK4Q86YV6 388 aaPredicted RBP14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 METTL4Q8N3J2 472 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 OR2T11Q8NH01 316 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 CHTF18Q8WVB6 975 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 DYDC1Q8WWB3 177 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 C3orf30Q96M34 536 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 SERPINI1Q99574 410 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 CTRCQ99895 268 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 CLK4Q9HAZ1 481 aaKnown RBP14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 STARD5Q9NSY2 213 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 CUTCQ9NTM9 273 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 FOXJ2Q9P0K8 574 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 PISDQ9UG56 409 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 SRPK3Q9UPE1 567 aa14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 DSPP15924 2871 aaKnown RBP14.07□□□□□ -0.16
SNRPA1-207ENST00000559309 TMEM8BA6NDV4 472 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 SLCO1B7G3V0H7 640 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 PLPP1O14494 284 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 PIP5K1BO14986 540 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 GALR3O60755 368 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms