RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 VPS11Q9H270 941 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 SLC26A1Q9H2B4 701 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 CDC42EP4Q9H3Q1 356 aaKnown RBP11.37□□□□□ -0.59
TPM1-216ENST00000558910 KLHL31Q9H511 634 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 SLAMF7Q9NQ25 335 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 SEMA3GQ9NS98 782 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 ANAPC2Q9UJX6 822 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 NXT1Q9UKK6 140 aaKnown RBP11.37□□□□□ -0.59
TPM1-216ENST00000558910 NFU1Q9UMS0 254 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 NOVA2Q9UNW9 492 aaKnown RBP11.37□□□□□ -0.59
TPM1-216ENST00000558910 KCNE2Q9Y6J6 123 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 SPENQ96T58 3664 aaKnown RBP11.36□□□□□ -0.59
TPM1-216ENST00000558910 NSG1A0A0A6YYJ2 146 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 TRBC2A0A5B9 178 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 CYSRT1A8MQ03 144 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 B4GALT2O60909 372 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 H2AFYO75367 372 aaKnown RBP11.36□□□□□ -0.59
TPM1-216ENST00000558910 SEC24DO94855 1032 aaPredicted RBP11.36□□□□□ -0.59
TPM1-216ENST00000558910 PHBP35232 272 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 SLC26A3P40879 764 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 KCNC1P48547 511 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 AGTR2P50052 363 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 EFNA3P52797 238 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 ATP6V0D1P61421 351 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 REEP5Q00765 189 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 RGS1Q08116 209 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 Q0VFX4 171 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 ADNP2Q6IQ32 1131 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 TMEM214Q6NUQ4 689 aaKnown RBP11.36□□□□□ -0.59
TPM1-216ENST00000558910 MYLK4Q86YV6 388 aaPredicted RBP11.36□□□□□ -0.59
TPM1-216ENST00000558910 RBMXL3Q8N7X1 1067 aaKnown RBP11.36□□□□□ -0.59
TPM1-216ENST00000558910 ANKRD53Q8N9V6 530 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 SREK1Q8WXA9 508 aaKnown RBP11.36□□□□□ -0.59
TPM1-216ENST00000558910 METTL21AQ8WXB1 218 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 POM121Q96HA1 1249 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 POPDC3Q9HBV1 291 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 MKKSQ9NPJ1 570 aaPredicted RBP11.36□□□□□ -0.59
TPM1-216ENST00000558910 DNAJC11Q9NVH1 559 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 PTGFRNQ9P2B2 879 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 ASB1Q9Y576 335 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 PCDHGA9Q9Y5G4 932 aaKnown RBP11.36□□□□□ -0.59
TPM1-216ENST00000558910 CSAG2Q9Y5P2 127 aa11.36□□□□□ -0.59
TPM1-216ENST00000558910 A8MUA0 341 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 KIF2AO00139 706 aaPredicted RBP11.35□□□□□ -0.59
TPM1-216ENST00000558910 DPM1O60762 260 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 STK16O75716 305 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 WISP3O95389 354 aaPredicted RBP11.35□□□□□ -0.59
TPM1-216ENST00000558910 BMP10O95393 424 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 NSA2O95478 260 aaKnown RBP11.35□□□□□ -0.59
TPM1-216ENST00000558910 IGHEP01854 428 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 LTA4HP09960 611 aaKnown RBP11.35□□□□□ -0.59
TPM1-216ENST00000558910 SLC35E2BP0CK96 405 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 C1GALT1C1LP0DN25 315 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 PCNAP12004 261 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 TYK2P29597 1187 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 CDC16Q13042 620 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 AIMP2Q13155 320 aaKnown RBP11.35□□□□□ -0.59
TPM1-216ENST00000558910 MYBPC3Q14896 1274 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 ZKSCAN8Q15776 578 aaPredicted RBP11.35□□□□□ -0.59
TPM1-216ENST00000558910 XKR6Q5GH73 641 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 VWA5B1Q5TIE3 1220 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.35□□□□□ -0.59
TPM1-216ENST00000558910 ARHGEF39Q8N4T4 335 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 CEP112Q8N8E3 955 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 ABHD11Q8NFV4 315 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 TSLPQ969D9 159 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 TM4SF19Q96DZ7 209 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 SCYL1Q96KG9 808 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 CYTH2Q99418 400 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 VN1R1Q9GZP7 353 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 ILKAPQ9H0C8 392 aaPredicted RBP11.35□□□□□ -0.59
TPM1-216ENST00000558910 ZNF552Q9H707 407 aaPredicted RBP11.35□□□□□ -0.59
TPM1-216ENST00000558910 PELI2Q9HAT8 420 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 SNX15Q9NRS6 342 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 C14orf105Q9NVL8 296 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 ZNF358Q9NW07 568 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 PLA2G3Q9NZ20 509 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 CPSF2Q9P2I0 782 aaKnown RBP11.35□□□□□ -0.59
TPM1-216ENST00000558910 IKBKGQ9Y6K9 419 aa11.35□□□□□ -0.59
TPM1-216ENST00000558910 MYO18BQ8IUG5 2567 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 KCNE1BA0A087WTH5 132 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 A0A096LPK6 155 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 MYOCOSA0A1B0GUC4 107 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 LRRC14BA6NHZ5 514 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 A8MUI8 341 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 C4orf51C9J302 202 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 FAM227AF5H4B4 570 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 CHST10O43529 356 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 CEACAM4O75871 244 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 ONECUT2O95948 504 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 ALPPP05187 535 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 C2P06681 752 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 INHBAP08476 426 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 C8orf89P0DMQ9 161 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 COX6A1P12074 109 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 GFAPP14136 432 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 ALOX12P18054 663 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 GNAZP19086 355 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 CRABP2P29373 138 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 ARL1P40616 181 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms